Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu3g1416 | ATGGCAGACCCAGCAAGTTTCATTGCCAGCTGGTTAACTCCCTCTTCCCTCTTCGTCCTCGTCAACCTCGTGATAGGAACAATAGCGATCACTTCTCGCTTCACTCCCAAAAACCAACACCACCACCCTCACCTCGCTCCTTCACCCTCCCTTCTCCAACGAGTCAGCTCCTTCAATCTCACTCACAACTATAACCATCATCACCACCAAGACCCAGACTTCACTCAGCCCCAACTCGTTCCAACACCCTCGTTATTGGAGCGAGTCACGTCCTTCAATCTCTCCTTCCGCAAACACACACCCTCACATGAAGAAACACAGCAACTCCAACCCGAACACGCCGAATCTAGAAACCCGGAACTGGTTCGGACACCCTCGCTGTTGGAGCGCCTCACTTCTTTCGATCTTTCTCTTCACAAGCAAGAACCCACACATGCACAAACACAACACGTGCAACCCGAACCCGAACCTGAACAGCCGGAACTGGTTCGGAGTCCCTCGCTCCTGCAGCGGCTACAGTCCATAAACTTGTCGCGTCTCTACCGATCAGAGTCCGTACACGGAGAGGATCCGAGTGGCGGGTCGGGTAAGACGGAGATGCGGAGATCAGCAAGCGAGAGGGGGGTCTCGACAGAGCGCGAGGAGGAAGAGGAGGTGGAGAGGCGGAGACCGCAAACGGCGAGGGTTGAAGGAACGTGGTGCAGAGAAGAGGAGGAGGTGGACGCTAAAGCTGATGATTTCATCAACAGGTTCAAGAAGCAGTTGAGGTTGCAGAGGATTGACTCTCTTCTTCGTTACAGAGCAGGTAACTGA | 813 | 0.54 | MADPASFIASWLTPSSLFVLVNLVIGTIAITSRFTPKNQHHHPHLAPSPSLLQRVSSFNLTHNYNHHHHQDPDFTQPQLVPTPSLLERVTSFNLSFRKHTPSHEETQQLQPEHAESRNPELVRTPSLLERLTSFDLSLHKQEPTHAQTQHVQPEPEPEQPELVRSPSLLQRLQSINLSRLYRSESVHGEDPSGGSGKTEMRRSASERGVSTEREEEEEVERRRPQTARVEGTWCREEEEVDAKADDFINRFKKQLRLQRIDSLLRYRAGN* | 271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu3g1416 | 270 | PANTHER | DUF4408 DOMAIN PROTEIN | 3 | 68 | - | - | |
| Pvu3g1416 | 270 | PANTHER | DUF4408 DOMAIN PROTEIN | 63 | 103 | - | - | |
| Pvu3g1416 | 270 | PANTHER | DUF4408 DOMAIN PROTEIN | 195 | 267 | - | - | |
| Pvu3g1416 | 270 | PANTHER | COTTON FIBER (DUF761) | 3 | 68 | - | - | |
| Pvu3g1416 | 270 | PANTHER | COTTON FIBER (DUF761) | 63 | 103 | - | - | |
| Pvu3g1416 | 270 | PANTHER | COTTON FIBER (DUF761) | 195 | 267 | - | - | |
| Pvu3g1416 | 270 | Pfam | Cotton fibre expressed protein | 237 | 267 | IPR008480 | - | |
| Pvu3g1416 | 270 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - | |
| Pvu3g1416 | 270 | MobiDBLite | consensus disorder prediction | 98 | 119 | - | - | |
| Pvu3g1416 | 270 | Pfam | Domain of unknown function (DUF4408) | 6 | 34 | IPR025520 | - | |
| Pvu3g1416 | 270 | MobiDBLite | consensus disorder prediction | 194 | 230 | - | - | |
| Pvu3g1416 | 270 | MobiDBLite | consensus disorder prediction | 182 | 230 | - | - | |
| Pvu3g1416 | 270 | MobiDBLite | consensus disorder prediction | 96 | 120 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu3g1416 | Pvu-Chr3 | 32832106 | 32833438 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu3g1416 | - | - | var:108322704 | 438.728 |
Event-related genes