Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2393 ATGGCGTGGCTGCTTCGCACCGCTAGCTCTTCTATTCTTAAACGTTCTTTCTTCCATTCCGACCTTCTGACGCGCTTTTGCTTCAAACCTGGACTATTGGGCACGTCTCAAGTTTTGAGCTTTTCAACTCGTAGAAGGAGGTCTAAATCAGATGGAAGTGACTCAGGTGAAGAGAACATGTCTAAGAAAGATGTGGCCCTACAACAAGCTATTGATCAGATCACTTCTGCATATGGAAAGGGATCTATCATGTGGCTTGGTCGTTCTGTGTCACCTAAAAATATTGCTGTGGTGTCTACTGGTTCTTTTGCTCTTGATATAGCACTTGGGGTTGGAGGTCTTCCAAAGGGGCGTGTTGTGGAAATATTTGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTACATGTGATTGCAGAAGCACAGAAGCTAGGAGGCTACTGTGCCTTTGTTGATGCTGAGCATGCACTTGATAAGACACTTGCAGAGTCAATTGGAGTAAATACTAAGAACTTGCTTCTCTCACAACCCGATTGTGGTGAACAAGCACTTGGCCTTGTGGATACCTTAATTCGGAGTGGTTCAATTGATGTAGTTGTTGTTGACAGTGTGGCTGCTCTGGTTCCTAAAGGTGAGCTTGATGGTGAGATGGGTGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGTCAGGCTCTTCGGAAATTGTGCCACTCCTTGTCTCTTTCCCAGTGTATATTGGTTTTTATAAACCAGGTGAGGTCAAAGATTTCTACTTTTGGGGGATTTGGTGGTCCCACTGAAGTTACTTGTGGTGGTAATGCACTGAAGTTCTATGCTTCTGTGCGGTTAAATATCAAAAGAATTGGGTTTGTCAAGAAGGGTGAAGAGACTTTGGGAAGCCAGGTTCTTGTGAAGGTTGTGAAGAACAAGCATGCCCCTCCATTTAAAACTGCACAGTTTGAGCTAGAGTTTGGCAAGGGTATTAGTAGAGAATCAGAGGTTATTGAGTTGAGCATAAAATACAAACTCATAAGGAAGAGTGGTTCATTTTATGAATATAATGGCCAGAATTTCCATGGCAAGGATGCTCTAAAGAGGTTCCTGGTGGACAGCGATGGTCTACAAGAATTAGCAACAAAGCTCAGGGAGAAGATTCTTAATGTAGAGCCGGAACTGGACCCAGAGGATCCGGCGATGAACGGAGACGTTATGGAAGAAATGGTATCTCTAGATTCTACTGATGAAACTGCTGCTGCTGCTGCCGTAGAAGCATAA 1278 0.4429 MAWLLRTASSSILKRSFFHSDLLTRFCFKPGLLGTSQVLSFSTRRRRSKSDGSDSGEENMSKKDVALQQAIDQITSAYGKGSIMWLGRSVSPKNIAVVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKLGGYCAFVDAEHALDKTLAESIGVNTKNLLLSQPDCGEQALGLVDTLIRSGSIDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILVFINQVRSKISTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETLGSQVLVKVVKNKHAPPFKTAQFELEFGKGISRESEVIELSIKYKLIRKSGSFYEYNGQNFHGKDALKRFLVDSDGLQELATKLREKILNVEPELDPEDPAMNGDVMEEMVSLDSTDETAAAAAVEA* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2393 425 Gene3D - 93 386 IPR027417 -
Pvu9g2393 425 SMART AAA_5 116 290 IPR003593 -
Pvu9g2393 425 Hamap Protein RecA [recA]. 63 390 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 ProSitePatterns recA signature. 275 283 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pvu9g2393 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 329 IPR027417 -
Pvu9g2393 425 MobiDBLite consensus disorder prediction 44 63 - -
Pvu9g2393 425 MobiDBLite consensus disorder prediction 44 61 - -
Pvu9g2393 425 PRINTS RecA protein signature 152 181 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 PRINTS RecA protein signature 186 215 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 PRINTS RecA protein signature 224 253 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 PRINTS RecA protein signature 272 300 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 SUPERFAMILY RecA protein, C-terminal domain 330 384 IPR023400 -
Pvu9g2393 425 PANTHER RECA 1 413 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 Pfam recA bacterial DNA recombination protein 66 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 ProSiteProfiles RecA family profile 2. 263 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pvu9g2393 425 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 413 - -
Pvu9g2393 425 TIGRFAM tigrfam_recA: protein RecA 63 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pvu9g2393 425 ProSiteProfiles RecA family profile 1. 94 253 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2393 Pvu-Chr9 34143604 34149542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2393 K03553 - gmx:100798983 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2393 9 34143604 34149542 Pvu9g2393 9 34143604 34149542 ECH
Pvu3g1405 3 32704395 32714120 Pvu9g2393 9 34143604 34149542 PCT