Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2392 ATGTCCAACAACAACCAGAACATCACCATGACCGATCTCACTTCAGCACTCAACGAAGACAATCGCGCCGATCTAGTCAGTGCTCTCAAGAGTAAGATACAGAGTCTTGCTGGACAGCATTATGATATTCTGGAGACTCTATCGCCTGTCGTCAGGAAGCGTGTTGAATCTCTTAGGGAGATTCAGGGTAAACATGATGAAATAGAGGCTGAATTCTTTAAGGAGAGAGAAGCTCTTGAAGCTAAGTACCAAAAGTTGTATCAGCCGTTGTACACAAAGCGCTTTGATATAGTAAATGGTGTTACTGAAGTGGACGGGGCAGCAAATGAAACAACCGATGAATCAGAAGAGGATAATGAGAAAGGAGTACCTTCTTTTTGGCTCAATGCAATGAAAAATAATGATGTGTTGGCTGAAGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTAAAAGACATCAAGTGGAGCCGGGTAGAAAACCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATACTTACTTTTCAAACTCTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTACCCGGGAAAATGCTTGACTCAGAAGGTGTTGAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAACTGTGAAAGCTTCTTCAATTTTTTCAAACCACCAGAGGTTCCTGAAGATGATGATGACATTGATGAAGATTTGGCTGAGGAGCTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCAACTATAAGGGACAAAATTATCCCTCATGCTGTATCTTGGTTTACCGGGGAGGCTGTTCAGGGAGATGAGTTTGAAGACCTGGAGGATGACGAAGACGAAGATGATGAGGAGGATGAAGAAGAGGATGAAGACGAAGATGACGATGATGAAGAGGAAGAGGAGGAAGACACTAAGACTAAAAAGAAGAAGAGTGGAAGGGCACAGATTGGTGATGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1086 0.4227 MSNNNQNITMTDLTSALNEDNRADLVSALKSKIQSLAGQHYDILETLSPVVRKRVESLREIQGKHDEIEAEFFKEREALEAKYQKLYQPLYTKRFDIVNGVTEVDGAANETTDESEEDNEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRVENPKGFKLEFFFDTNTYFSNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTENCESFFNFFKPPEVPEDDDDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAVQGDEFEDLEDDEDEDDEEDEEEDEDEDDDDEEEEEEDTKTKKKKSGRAQIGDGQQGERPPECKQQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2392 361 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 361 IPR002164 GO:0005634|GO:0006334
Pvu9g2392 361 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 361 - -
Pvu9g2392 361 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Pvu9g2392 361 Gene3D - 45 104 - -
Pvu9g2392 361 Gene3D Nucleosome assembly protein 118 294 - -
Pvu9g2392 361 MobiDBLite consensus disorder prediction 298 331 - -
Pvu9g2392 361 MobiDBLite consensus disorder prediction 293 361 - -
Pvu9g2392 361 SUPERFAMILY NAP-like 30 293 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2392 Pvu-Chr9 34138375 34141719 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2392 K11279 - gmx:100783783 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2392 9 34138375 34141719 Pvu9g2392 9 34138375 34141719 ECH
Pvu3g1404 3 32698187 32701275 Pvu9g2392 9 34138375 34141719 PCT