Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1404 ATGAGTAACGACAAGGACACCTTCAACGTCGCCGATCTCTCCTCCGTACTCAACGAGGAAAATAGAGCGGACCTAGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCCGGGCAACACTCCGATATTCTTGAGTCGTTGTCACCTATTGTCAGGAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGCCAACACGATGAATTAGAGGCTAAATTTTTTGAGGAGAGAGCAGCACTCGAAGCCAAATACCAAAAAATGTATCAACCACTGTACACGAAGCGGTATGACATAGTAAATGGTGTTACCGAAGTCGAAGAAGCGGCAGTGAACGAAAAAACACCCGATAGTGGGGAGGATGAAGAGAAGGGAGTGCCTGCGTTTTGGCTTACTGCAATGAAAAACAATGAAGTGTTAGCCGAGGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTCAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATCCTTATTTTACTAATACTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCAATTTTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACTCAGGAAAATGCCTGACACAGAAGATTCTTAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAGTTGTGAAAGTTTCTTCAATTTCTTCAATCCACCACAAGTTCCTGAAGATGATGAAGACATTGATGAAGAAGCGGCTGAGGAGCTCCAGAATCAGATGGAACAAGACTATGACATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCTGTGTCCTGGTTTACTGGAGAGGCCATCCAGGGGGATGAATTTGGAGAACTAGAGGAAGATGAGGACGATGAAGATGTTGAAGAAGACGATGATGAAGAGGATGACGAAGATGATGACGATGACGAAGAGGATGAGGAAGAGAACAAGATTAAAAAGAGGTCATCAGCACCCAAGAAGAGTGGAAGAGCACAGCTTGGTGAAGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1107 0.4345 MSNDKDTFNVADLSSVLNEENRADLVNALKSKIQSLAGQHSDILESLSPIVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKMYQPLYTKRYDIVNGVTEVEEAAVNEKTPDSGEDEEKGVPAFWLTAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTEIQWHSGKCLTQKILKKKPKKGSKNAKPITKTESCESFFNFFNPPQVPEDDEDIDEEAAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGELEEDEDDEDVEEDDDEEDDEDDDDDEEDEEENKIKKRSSAPKKSGRAQLGEGQQGERPPECKQQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1404 368 SUPERFAMILY NAP-like 30 294 IPR037231 -
Pvu3g1404 368 Gene3D - 45 104 - -
Pvu3g1404 368 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Pvu3g1404 368 Gene3D Nucleosome assembly protein 119 295 - -
Pvu3g1404 368 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 368 IPR002164 GO:0005634|GO:0006334
Pvu3g1404 368 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 368 - -
Pvu3g1404 368 MobiDBLite consensus disorder prediction 295 368 - -
Pvu3g1404 368 MobiDBLite consensus disorder prediction 300 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1404 Pvu-Chr3 32698187 32701275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1404 K11279 - gmx:100785314 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1404 3 32698187 32701275 Pvu3g1404 3 32698187 32701275 ECH
Pvu3g1404 3 32698187 32701275 Pvu9g2392 9 34138375 34141719 PCT