Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2360 ATGATGTTGAGTTTGCAAACACATTCATCGTTCTTTCCCCTCATTTTCTCTCAGTTCAAACCCTGTTCTTCACCCTTCAAATTCAAACCCTGTTCTTCACCCTCCAAATTCAAACCCCGTTTCTCAACAATCACAATGTCCTCAAGCCAAACTCTGGTGGAGCACATCGTCCTTGTCAAGGTAAAAGACGGAACTGAACAGAGCAAGGTCGACGACTTGGTTAATGGCATGAACTCGTTAGCCGCCATCGACGGGGTGCTATACCTCACGGCGGGCCCAGTTCTCCGTAGCAGACCCGCCGCCGCTTTCACCCACTTCCTCCACAGCCGCTACAGCTGCAAGGACCACCTCGACGCCTACAACGTGAACCCCACCCACATCGCCGTCGTCACGAACTCCCTTTTTCCCATCTGCGACAACCTCTTGGTCGTCGACTGGTTCGCCGGAAAACCGACCCTTAAGACGCCGGCGACGGGCTCCGGGCTCCGCGTGAGGTTTTTGAAACTGAAGGGGGGAGACGAGCAGGTTAAGGAGAAGGTTTTGGGTGTTGTAGGAGAGGAGGATGGTGGAGAGTTTTCTTACGGCGAGAACATCTCGCCGGAGAGAGCACAGGGGTTCTCAATCGCTTCGCTGGCGGTTTTCCCCGGACAGAAGGAACTGGAGAGTGTGGAGTTGGAAGAAGGGTTGGCGAAGGTTGAGGAAGATGTGGAGGATGTGGTGGTTGTTGACTATGTGCTGCCGTAG 744 0.5403 MMLSLQTHSSFFPLIFSQFKPCSSPFKFKPCSSPSKFKPRFSTITMSSSQTLVEHIVLVKVKDGTEQSKVDDLVNGMNSLAAIDGVLYLTAGPVLRSRPAAAFTHFLHSRYSCKDHLDAYNVNPTHIAVVTNSLFPICDNLLVVDWFAGKPTLKTPATGSGLRVRFLKLKGGDEQVKEKVLGVVGEEDGGEFSYGENISPERAQGFSIASLAVFPGQKELESVELEEGLAKVEEDVEDVVVVDYVLP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2360 247 Pfam Stress responsive A/B Barrel Domain 53 147 IPR013097 -
Pvu9g2360 247 SMART Dabb_2 53 148 IPR013097 -
Pvu9g2360 247 SMART Dabb_2 162 246 IPR013097 -
Pvu9g2360 247 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 42 246 - -
Pvu9g2360 247 SUPERFAMILY Dimeric alpha+beta barrel 52 148 IPR011008 -
Pvu9g2360 247 PANTHER - 42 246 IPR044662 -
Pvu9g2360 247 Gene3D - 44 148 - -
Pvu9g2360 247 ProSiteProfiles Stress-response A/B barrel domain profile. 53 146 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2360 Pvu-Chr9 33745882 33746985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2360 - - var:108330950 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2360 9 33745882 33746985 Pvu9g2360 9 33745882 33746985 ECH
Pvu3g1370 3 32256725 32257891 Pvu9g2360 9 33745882 33746985 PCT