Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1370 ATGCTGCGTTTGGGAACTCCGTTGTCAAATCAGTTTTCTCTGACGTTCTCGGCCTGCAGACAGCTCCGTAAGGTTCAAGCGCGCCCCTTCAGATCTTCCATCAAGATGAGTTCAGCAAAAACGGTGGAGCACATTGTCCTGTTCAAGGTCAAGGAGGAGACGGAGGCGTCAAAGGTGAGTGAAATGGTGAACGGACTCGGTTCCCTCCTATCGCTGGACACCGTCCTCCACCTCAGCGTGGGCCCGCTCCTCCGTAACCGATCCTCTTCTTTAACCTTCACTCACATGCTCCACACCCGCTACAAGTCCAAGGAGGATCTCCAAGCCTACTCCGCGCACCCTAGCCACGTCACGGTCGTCAAGGAAAACGTGCTTCCCATCATGGACGACATCATGGCCGTCGATTGGATCGCGGATGGCCTCAGCACCGTCGTTCCGCCGCCGGGCTCCGCGCTTCGTGTCAGCTTCTTAAAATTGAAGGAGGGTGCGGCTGGTGACGAGGTTTTGGGTGTGGTTAGAGGAATTCCTGAGAGTTTCAAGCAGATTAGTGAGTTCAGTGTTGGGGAGAATTTTTCACCGGGGAGAGCCAAGGGTTTCTCAATTGCTTCGCTTGCCGTTTTTGCGGGACCGAGCGAGTTGGAGGCCTTGGATTCGAATCAGGAGTTGGTGAATTACCAGAAGGATAAGGTTAGGGATCAGATCGAGAGTGTGGTCGTTGTTGATTACGTGGTGCCGCCACCTCCTCCTGCTCCGAGTGCGAGCCTTTGA 768 0.5469 MLRLGTPLSNQFSLTFSACRQLRKVQARPFRSSIKMSSAKTVEHIVLFKVKEETEASKVSEMVNGLGSLLSLDTVLHLSVGPLLRNRSSSLTFTHMLHTRYKSKEDLQAYSAHPSHVTVVKENVLPIMDDIMAVDWIADGLSTVVPPPGSALRVSFLKLKEGAAGDEVLGVVRGIPESFKQISEFSVGENFSPGRAKGFSIASLAVFAGPSELEALDSNQELVNYQKDKVRDQIESVVVVDYVVPPPPPAPSASL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1370 255 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pvu3g1370 255 Gene3D - 152 246 - -
Pvu3g1370 255 ProSiteProfiles Stress-response A/B barrel domain profile. 151 242 IPR013097 -
Pvu3g1370 255 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 27 250 - -
Pvu3g1370 255 SMART Dabb_2 42 138 IPR013097 -
Pvu3g1370 255 SMART Dabb_2 151 244 IPR013097 -
Pvu3g1370 255 PANTHER - 27 250 IPR044662 -
Pvu3g1370 255 SUPERFAMILY Dimeric alpha+beta barrel 152 248 IPR011008 -
Pvu3g1370 255 Gene3D - 33 139 - -
Pvu3g1370 255 ProSiteProfiles Stress-response A/B barrel domain profile. 42 136 IPR013097 -
Pvu3g1370 255 Pfam Stress responsive A/B Barrel Domain 42 137 IPR013097 -
Pvu3g1370 255 Pfam Stress responsive A/B Barrel Domain 153 244 IPR013097 -
Pvu3g1370 255 SUPERFAMILY Dimeric alpha+beta barrel 40 141 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1370 Pvu-Chr3 32256725 32257891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1370 - - gmx:100527770 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1370 3 32256725 32257891 Pvu3g1370 3 32256725 32257891 ECH
Pvu3g1370 3 32256725 32257891 Pvu9g2360 9 33745882 33746985 PCT