Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2356 ATGACTGGAATGTCAAAGGAGGAAGTGTCTGGTAGTCCCAGATGGGGTGCTTCAATTATTATGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCTGCTGCTGTGAATTCTCCAAGGCCATCTGTTATATATTCATCAAAAAATGATCAAGGTGGCAATCAACTTCAAAAACTGCAGTATCAAGTTACAAAAATGTTAAAAGGATTTTCTCGCCCTCCTGAAGTTAAATATAATAATTACAATCCGGAAATCCTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTACAGTACATGGACCATAGGTCATTGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATATTTCTTAAGAAAGTCTGAAGGCCCTGGTAAATTAAGAAGTGCTCTTGGTTATCAGAATCAATCCCGTGTGGAGCCTAGTCTTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGACAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTCGAGAGAACACCTTCCATGAGTGAATTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGCTACAGGGTGCTGATAATTCAACTCTTTATGGGTGCTGTGTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTGCTCTCCCTGGTTTCTGATAAACAGTCGAGTTATTCTCCTTTGAAACGTGAACGCCATATATTGACTACACAAAGATGTTACTGCATTCTCTCAAGGCTCCCATTCTTTGAATTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAACGACTAGATCGGTTGACTAAAAACATTGGAGATTTAAATTTAGAATATGTCGAAGGTAGCTGTGAGGAAGAAAATTTTGGTGAAGATTCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACACGATGACAGTCCAACGATTTCTCAGTCAAGCCTAAGAAATTCCTCACCAGAAATCATTGAGGATGATAGTAATTATCCCAATAAACAAATAGTTAACGGGGAGCTGCATATATTTAATGATAGAGTCAATGATGAGCCTTGTGATCCTGAAAATGATAGAAAAACTGTTAATGAAGAATCTGGCCCTACAAATGCTGACGATAATGATTTGTATGGAGATGCTTTTGTAACAAATAAACAGTCAGAAGATAGGCGTTTACCCAATGCTATTCTTCCACTCTTGCGGTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGAAAGAAATTTCAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAGGAGGATTTGAATGACCTAAATGGTATTCTTGAGTGGGCTAAGGCAAACAACTGTGGATTATTACAGATTGTAAGTGAGTATTATTGCTTAAGTTGTCCTGCAAGGGGCAAATCACTTAGGTTTCATCCTTTGGAGCACCTGCATCCCTTAGAGTATCACAGACCAGATGAGGCAATTCTACATCTTGCTGGTTCAACTGTTGATTTGAAATCTTTCAGTACAGGTCTGGAATTAGCAGAGACTCATAATTCTCTTCTGGCTGAGGAGGAGGCAACTGCATTATCTACATGGGCTGTAGGGTGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAAATAGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCATCAGTTTTATCAGTTATTTCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTAATGCCGGTTCTACCAAATGACATGCTTGAGTTTCTGGACGCTCCTGTCCCTTACATAGTTGGTATCAAAAACAAGACCAGTGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGGTCGACGTCAACAGGAATCAGGTGAAGTCATCAACAATACCTCAATTGCCAAGGCAGAAAGAGTTAATGGCTTCTTTACGCCCTTATCATGCGACTCTTGTGGGAGAAAGTTACTTGGGTATGAGAAGGCCAGTATATGAATGCACAGAAGTGCAGGTAGAAGCTGCCAAGGGATTCTTATCAGTGTTAAGGTCTTATTTGGATTCGCTTTGCCATAATATTCGTTCGCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATCGACTCATTTCCTTATCGCGATAGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTGCATACAGATCTTGTTCTCTCTTTTTTCCAAAAGGAATAG 2415 0.4046 MTGMSKEEVSGSPRWGASIIMQTTEDVARAVAAAVNSPRPSVIYSSKNDQGGNQLQKLQYQVTKMLKGFSRPPEVKYNNYNPEILTTQKRQWAANFQLQYMDHRSLKEPTKLFESMVVVGLHPNCDIQALQRQYFLRKSEGPGKLRSALGYQNQSRVEPSLEPQVLFVYPPEKQLPLKDKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLVSDKQSSYSPLKRERHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLDRLTKNIGDLNLEYVEGSCEEENFGEDSECMLVNDRLEDRHDDSPTISQSSLRNSSPEIIEDDSNYPNKQIVNGELHIFNDRVNDEPCDPENDRKTVNEESGPTNADDNDLYGDAFVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCDERNFRSDADDTETEDASFSGQEDLNDLNGILEWAKANNCGLLQIVSEYYCLSCPARGKSLRFHPLEHLHPLEYHRPDEAILHLAGSTVDLKSFSTGLELAETHNSLLAEEEATALSTWAVGCMCGTLRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVISLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIVGIKNKTSEVQSKLTNNVILVDVNRNQVKSSTIPQLPRQKELMASLRPYHATLVGESYLGMRRPVYECTEVQVEAAKGFLSVLRSYLDSLCHNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDLVLSFFQKE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2356 804 SMART DENN_cls 273 678 IPR001194 -
Pvu9g2356 804 MobiDBLite consensus disorder prediction 343 370 - -
Pvu9g2356 804 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 804 - -
Pvu9g2356 804 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 804 - -
Pvu9g2356 804 MobiDBLite consensus disorder prediction 385 416 - -
Pvu9g2356 804 Pfam uDENN domain 163 240 IPR005113 -
Pvu9g2356 804 MobiDBLite consensus disorder prediction 448 478 - -
Pvu9g2356 804 MobiDBLite consensus disorder prediction 350 370 - -
Pvu9g2356 804 SMART uDENN_cls 109 242 IPR005113 -
Pvu9g2356 804 Gene3D - 573 740 IPR043153 -
Pvu9g2356 804 MobiDBLite consensus disorder prediction 385 404 - -
Pvu9g2356 804 Pfam DENN (AEX-3) domain 557 677 IPR001194 -
Pvu9g2356 804 ProSiteProfiles Tripartite DENN domain profile. 147 804 IPR037516 -
Pvu9g2356 804 Gene3D - 100 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2356 Pvu-Chr9 33677411 33689149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2356 - - var:108331642 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2356 9 33677411 33689149 Pvu9g2356 9 33677411 33689149 ECH
Pvu3g1365 3 32159497 32174323 Pvu9g2356 9 33677411 33689149 PCT