Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1365 ATGACTGGAATATCTAAGGAAGAAGGGTCAGCTAGTCCTAGTTGGGGTGCTTCATTTTTTATGCAGACAAAAGAGGACGTGGCTAGGGCCGTTGCTGCTGCTGTTAACTCTCCGATGTCATCGAAAGATGATCATAGTGGTAGCCAACTTCAAAGGCTTCAGTATCAAGTTGCTCGAATGTTAAAAGGCTTTTCACACCCTCCTGATGTTGAAAACACAAACTACAATCCTGAAATCCTGACTAGTCTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTATATGGACCATAAGACTTGGAAGGAGCCCTCACGACTATTTGAGAGCATGGTGATTGTCGGACTTCATCCTAATTGTGATGTTCAGGCACTGCAAAGGCGATATGTGGATAGGAAGTTTGAAGGCTCTGCTAAATTGAGAAGTGCACTTGGTTATCAGAGTCAATCTTGTGTAGAACCCAACATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAATGTAAAGACCTTCTTTCTTTCTGCTTCCCGGGAGGCTTAGAGGTCGGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATTTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGGAAAAGCCTTCTGGATTGCTTTCTCTGATTTCTGATAAGCAGCCATCTTACTCGTCTTTGAGACGACATATACTAACCACTCAGAGATGTTACTGCATTCTTTCAAGGCTTCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAGAAGTGTTGGAGATCTAAATTTAGAATATGATGAAGGTAATAGCTTTAAGGAAGAAAATTCAGAGGGCTACTCAGAGAGTTCTTTGGTGAGTGATGGACCACTAGAAGATAGACTTGGTGGAAATCCAAGAATTTCTCCATTGAGAGCAGTAAAGTCTACACCTGAAAACATTGTGGATGATGGTCAACCAGAGCACCTAATGGTTGATGGGGAGCTGCAGACATATAAGGAGAGAATCAATTATGATGATGGTTTTCTTGCTAATCCTGTAACAGATAGTACAACAACCAAAGAAGATTCTGGCCCTACAAATTCTGAAAATAATGATCAGTATGGAGATGCCTTTTCTACAAACAAACAGTCGGAAGACAAACATTTACCTAATGCTATTTTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGATCACCTTGTGAGGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTAAATGATATTCTTGAATGGGCAAAGAAAAATAACCATGGACCACTGCAAATTATAAGTCAGTATTACCGTTTAAGTTACCCAGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATAAGAGATCAGCTGAGTCATTTCTACGTCTTGCTGGCTCAACAGTTGTTTTGAAAACCCACAGTACTGGTCTGGAATTAGTTGATGCACATATTGCTCTCGTGGTGGAAGAGGCAAATGCATTATCTGAATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACGTTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCCCTAATCCAGCCTTACCGGTGGCAAAGCCTGCTAATGCCAGTTTTACCAAATGACATGCTTGACTTTTTAGATGCACCTGTCCCTTATGTAGTTGGTATCAGGAACAAGACCAGTGAAGTTCAGTCAAAGTTTACCAATGTTATTCTAGTTGATGCCGATAGAAACCAGGTGAAGTCACCAACATTACCACAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATTCAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTATATGAATGCACGGAAGTGCAGATTGAAGCTGCAAAGGGGTTCCTTTCGGTGTTAAGATCTTACTTAGATTCTCTTTGCTATAACATCCGTTCTCACACGATCACTAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGACTCGTTCCCTTACCGGGATCGGCATTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTACATACAGATCTTGTTCTCTCTTTCTTACAAAAGGAATAG 2400 0.4129 MTGISKEEGSASPSWGASFFMQTKEDVARAVAAAVNSPMSSKDDHSGSQLQRLQYQVARMLKGFSHPPDVENTNYNPEILTSLKRQWAANFQLQYMDHKTWKEPSRLFESMVIVGLHPNCDVQALQRRYVDRKFEGSAKLRSALGYQSQSCVEPNIEPQVLFVYPPEKQLPLKCKDLLSFCFPGGLEVGAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVEKPSGLLSLISDKQPSYSSLRRHILTTQRCYCILSRLPAFELHFGVLNSIFTQERLERLTRSVGDLNLEYDEGNSFKEENSEGYSESSLVSDGPLEDRLGGNPRISPLRAVKSTPENIVDDGQPEHLMVDGELQTYKERINYDDGFLANPVTDSTTTKEDSGPTNSENNDQYGDAFSTNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKKNNHGPLQIISQYYRLSYPARGSSLTFHPLEHLHPLEYKRSAESFLRLAGSTVVLKTHSTGLELVDAHIALVVEEANALSEWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLDFLDAPVPYVVGIRNKTSEVQSKFTNVILVDADRNQVKSPTLPQLPRQKELVSSLRPYHSTLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRHFMKLFVDTQLFSVHTDLVLSFLQKE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1365 799 MobiDBLite consensus disorder prediction 388 425 - -
Pvu3g1365 799 SMART DENN_cls 266 673 IPR001194 -
Pvu3g1365 799 MobiDBLite consensus disorder prediction 314 348 - -
Pvu3g1365 799 Gene3D - 95 303 - -
Pvu3g1365 799 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 799 - -
Pvu3g1365 799 MobiDBLite consensus disorder prediction 445 475 - -
Pvu3g1365 799 Gene3D - 567 735 IPR043153 -
Pvu3g1365 799 ProSiteProfiles Tripartite DENN domain profile. 138 799 IPR037516 -
Pvu3g1365 799 Pfam uDENN domain 158 235 IPR005113 -
Pvu3g1365 799 SMART uDENN_cls 104 237 IPR005113 -
Pvu3g1365 799 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 799 - -
Pvu3g1365 799 Pfam DENN (AEX-3) domain 531 673 IPR001194 -
Pvu3g1365 799 MobiDBLite consensus disorder prediction 387 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1365 Pvu-Chr3 32159497 32174323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1365 - - gmx:100801645 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1365 3 32159497 32174323 Pvu3g1365 3 32159497 32174323 ECH
Pvu3g1365 3 32159497 32174323 Pvu9g2356 9 33677411 33689149 PCT