Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2352 ATAAATAGCGTCTCTGAGACAGAGAGAGCACCGTTTTCCCTCCAAATCTCTTTTCCCTTTCACTCTGCTCCAACTACTTTCTCTGGATCTCACTCACACATTTTCAGTCACTTCATTTCCACTTCAAAACCCTATTATCGTATTTACTGCTTCCAATTTCTCATCAAAATGGTTCAAACCAAAACCACTCAAAACCCCTCTAAACCCCACGCCATCCACCCGCTCACACCCACCCAAACCCGAGAACCTTCCTCCCTTTCCGCCTCTCCCCCTCCTCGCCGCCGCAGCCTCCGCCTCGCCACCCTCTCCGACGCCTCCCCCGCCTCCCGCGCCGTCCTCAACTTAAGATCGGGAAAGAAGGTTCTCAAGAGAGCGATGGCAAACGGCGCAGAGGAACAAGGTAATGACGCAAACGAGGAGGCTGATGACGTTGATGTTAATGTCGCAACACGAGAGTCTGCAACGGAAAACTCAGCCGTCAATGTCAATATTATAGCAGATGATTCTGGTGTTAGGGTTTCCACTGGGAACCGGAAGCGCAAGAGTGACTCGACCGGTTCCGAACGCGAGGAGTTTCTCTGCTTAAGGTCGGGAAAGAAGGCTCTCAGGAGAACAATGGCTTTCGAGTCCGAAGAAAAAGTTACTGACGCAAATGATGATGATGATGATGTGGCAGTGGCGGTTGATGGCGATGTGGCAACACCGGAATCCAGAACGGAGAGCTCCGGTGTAAATAATGTACCCGCGCAAGTTCGAGAGCGTTCTAGAAACTCCAATGCAAGAGAGCGCCGTTCCGGTTTGAGGAGGAACGATTATATGGAGCGGTTCCACGACATTGCGCGGGAAAACGCGTCGCGGTTCGCTTTCTTCGCACCGGAAGAGGAAGATGATGGCCGGTCGCCGCCGGTTCCCGAAGCCGCTAGTGAGGAAATTGAGGACTGGCCCGGTCCTTTCTCCACGGCTATGAAAATCATCAGAGACCGAGGGATGAATCTTCAGAATGCTCAAACGAGTTCTCAGGCGAACTTGTGCGAGTCTATCAAGTGGGTTCCCAAGGCGCATAAAGGGGATGTGGGCGTTTTATCGGTCCCTTCGTTGCAGGATATGTGCTTTAGGATTCTTGTGAACAATGTTGATGCGATTGCATCGCTAGAGAGTGTGCCTGATGCGTTGAGGCACCGGCTTAGCCAGTTGCTCTGTGACTCGAGGAGAATTAACGGTCACTTTCTAGAGCTTCTCGTGCGTGGAACTCCCACGGAGATTCGGTTAAGGGACTGCTCGTGGTTGACTGAGGAACAGTTTACCGAGTGCTTTCGAATGTGTAACACGGAGAATTTGTCGGTACTGCAACTTGACCAGTGTGGGCGATGCTTGCCTGATTTTGTAATAGTTGCTACTTTAGCACGGTCACCTAGGAATTTGGCTAGATTAACTACCCTATCACTTCGTGGTGCATGCCGACTTTCAGATGGAGGTTTGCGTGCACTTGTTTCTTCAGCTCCTGCTCTTAGATCGATAAATCTTAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATCTTTTGGCTGAATCATTAAGTTATCTTCTGAAAGAGTTGTTCCTTGATGATTGCCAAGGCATTGATGCTGCACTAATTGTGCCAGCACTGATTGAGCTTGAACATTTAGAAGTGTTGTCAGTAGCTGGTATTCCAACTGTTTGTGATGAATTTGTCAAGAATTACATTGTTGCACGTGGCCAAAACATGAAAGAGCTCGTTTTGAAGGACTGTATAAACCTGACTGATTCATCAATCAAAGTTATTGTTGAGCATTGTCCAGGATTACGGGTGCTTGATATTATGAACCTGAACAGATTAACAGATTTATCTGTTGGATATCTTACCAATGGTTGCCGTGTACTTCATACCCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACCACTGGAGGGTCCCTGAAGGAACTGTTACTTAATAACATCAAGAAGGTTGGTTACCACACAACCTTGTCACTTGCAAACCATGCGAAAAAATTGCATTATCTGGATTTATCTTGGTGTAGAAATTTGACAGACAATGCACTGGGTTTGATTGTGGATAGCTGCTTGGCGCTGAGGTTACTCAGACTTTTTGGATGCACTCAGGTAACAGATGCATTTCTTAATGGCCACTCAAACCTACAGATACAGATAATTGGTTTGAAAATGTCTCCTGTTTTACAAGATGTCAAAGTTCCAGATCCTCACCAGGGTGCTTTGAATTATTCATCAGTCTCTTTAGATTTGGTATGA 2316 0.4724 INSVSETERAPFSLQISFPFHSAPTTFSGSHSHIFSHFISTSKPYYRIYCFQFLIKMVQTKTTQNPSKPHAIHPLTPTQTREPSSLSASPPPRRRSLRLATLSDASPASRAVLNLRSGKKVLKRAMANGAEEQGNDANEEADDVDVNVATRESATENSAVNVNIIADDSGVRVSTGNRKRKSDSTGSEREEFLCLRSGKKALRRTMAFESEEKVTDANDDDDDVAVAVDGDVATPESRTESSGVNNVPAQVRERSRNSNARERRSGLRRNDYMERFHDIARENASRFAFFAPEEEDDGRSPPVPEAASEEIEDWPGPFSTAMKIIRDRGMNLQNAQTSSQANLCESIKWVPKAHKGDVGVLSVPSLQDMCFRILVNNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRMCNTENLSVLQLDQCGRCLPDFVIVATLARSPRNLARLTTLSLRGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASIYLLAESLSYLLKELFLDDCQGIDAALIVPALIELEHLEVLSVAGIPTVCDEFVKNYIVARGQNMKELVLKDCINLTDSSIKVIVEHCPGLRVLDIMNLNRLTDLSVGYLTNGCRVLHTLKLCRNPFSDEAIAAFVETTGGSLKELLLNNIKKVGYHTTLSLANHAKKLHYLDLSWCRNLTDNALGLIVDSCLALRLLRLFGCTQVTDAFLNGHSNLQIQIIGLKMSPVLQDVKVPDPHQGALNYSSVSLDLV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2352 771 Gene3D Ribonuclease Inhibitor 570 655 IPR032675 -
Pvu9g2352 771 Gene3D Ribonuclease Inhibitor 656 753 IPR032675 -
Pvu9g2352 771 Gene3D Ribonuclease Inhibitor 372 569 IPR032675 -
Pvu9g2352 771 MobiDBLite consensus disorder prediction 232 267 - -
Pvu9g2352 771 MobiDBLite consensus disorder prediction 64 91 - -
Pvu9g2352 771 SMART LRR_CC_2 632 656 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 580 605 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 474 499 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 606 631 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 684 709 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 710 735 IPR006553 -
Pvu9g2352 771 SMART LRR_CC_2 500 525 IPR006553 -
Pvu9g2352 771 PANTHER UNCHARACTERIZED 235 765 - -
Pvu9g2352 771 MobiDBLite consensus disorder prediction 235 254 - -
Pvu9g2352 771 PANTHER F-BOX/LRR PROTEIN 235 765 - -
Pvu9g2352 771 MobiDBLite consensus disorder prediction 64 94 - -
Pvu9g2352 771 SUPERFAMILY RNI-like 420 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2352 Pvu-Chr9 33629095 33634270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2352 K15082 - gmx:100808150 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2352 9 33629095 33634270 Pvu9g2352 9 33629095 33634270 ECH
Pvu3g1360 3 32075267 32079649 Pvu9g2352 9 33629095 33634270 PCT