Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1360 ATGACCAACACCAATCCAATTCCAGATTCTAATCCTTCAAGCCTCTATGGTGATTCCGATTCCGACCTTGACGTCCTCATCAATGCTCTTTTCGAACCTAATCCCCAATTCCCATTTTTCGATCACCTCCAAGGATCCACCTCCGACTCCAAAGAATCATCCCTCAAGAGAGGATTAGACACCGCCGATGATTCTTCTCACACAGTAATTCCCCTCAAACGCGGTCGTATTGACAATGTCATCCCTCACCGCGCTGATCTCCATGCGCCCGTTCAAATTCAAAACCCTATTCCTCCTCCTCCTCCTCTTCCTCTCTCCCAGCCTCCGCCACATGCTGCTACCAATGGAGACCCTCACGCTGTGGAAGGGCAGAGGAAGCGCCCGGTGTTTGACTCCGATTTTCTGTCCAGGGCTCTCCGTGAAGCTGAATCGTTCTTTCCGCAGAATTCAGGCGATAACGACTTTAACTTTGACGTAGAACCTGGAGATTTTAGTGCACCTTATCTATCGCTGAATGATTATCGGAGGATTCGGAACATGGAACGTTTCCGACAGATAGCGAAGGAAAGCGCTACTCACTATGCTCGATTCACCTCGGAGGAGACCACAGAAGAAAGACCGTCGTCTTCTGCTGCGCCTCAGGGAATCGAGGATTCCACCTCTCCGTTTTCGATCTCGATGAAGGCGATCAAAGAGGGAGCGGCTAAAAAGAAGGGGCGTGATGCATGGGTTGCGAAGAATCAAAAAAGGGAGAAGAGGGTCTGTGTTCCCTCTTTGCAAGAACAGTGTCTCAAAATTCTTGCGGACAATGCTGATGCCATGGTTTCTCTTGAGGGTGTTCCGGATGAGTTGAGGCACAAGCTTTGCAAACTGCTCTGTGACTCGAGAAAGATGAATAATCACTTCCTTGAGCTTCTACTCAGTGGGTCTCCTACGGAGATTCGCCTGAGGGATTGCTCGTGGTTGACGGCGGAACAGTTCGCCGAATGTTTTCATTCTTGTGACACTGGAAGACTGGAGGTGCTGCAACTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTATTGGGTCCTCTGAGACAGTCGCCATGGCGGTTGCCGAGACTAGTTAGTCTGTCCCTCAGTGGTGCATGCCGTCTTTCAGACAAGGGGTTGCATGTTCTAGTTTCTTCTGCCCCATCACTAAGATCAATCAATTTAAGCCAGTGCTCCCTTCTCTCGTCTGTCAGTGTCAATATTTTGGCCCATTCGTTGGGATCCCTACTGAAAGAGTTATATCTTGATGATTGCCTAACCATTGATGCTGCACAAATTGTGCCGGCATTGAGGAAACTCGAACATTTAGAAGTGTTATCACTGGCTGGAATTCAAACAGTCTCTGATGAATTTATAGGGGATTACATCACTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTAGAAAATTAACCAATGCATCAATAAAAGTCATTGCTGAGCACTGTCCTGGGTTGTGTGCACTCGATCTTATGTATTTGGACAACTTGACGGATTTATCCATGGGATATCTTACAAATAGCTGTCGAGTACTCCATACATTGAAGCTCTGCCGTAATCAATTCAGTGATGAAGCAATTGCTGCATTTTTGGAGATTGCTGGAGAGTCCTTAAAAGAACTTGCACTTAATAATGTTAAGAAGGTTGGGCACCATACAGCCTTATCACTTGCTAGTCATTCGAAAAATTTGCATACTCTAGATCTGTCTTGGTGCAGAAAGTTGACAGACAATGAGTTGGGTTTGATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAACTTTTTGGATGCTCACTGGTAACAGATGTTTTTCTCAATGGGCACTCAAACCCAGATATTCAGATCCTTGGATTGAAGATGTCTTCTTTATTGCAAAATGTCACAGTGCCTGATGCCTGTGAAGGTCCTTTGCGTTATTCATCAGTTCGGTAG 1983 0.4619 MTNTNPIPDSNPSSLYGDSDSDLDVLINALFEPNPQFPFFDHLQGSTSDSKESSLKRGLDTADDSSHTVIPLKRGRIDNVIPHRADLHAPVQIQNPIPPPPPLPLSQPPPHAATNGDPHAVEGQRKRPVFDSDFLSRALREAESFFPQNSGDNDFNFDVEPGDFSAPYLSLNDYRRIRNMERFRQIAKESATHYARFTSEETTEERPSSSAAPQGIEDSTSPFSISMKAIKEGAAKKKGRDAWVAKNQKREKRVCVPSLQEQCLKILADNADAMVSLEGVPDELRHKLCKLLCDSRKMNNHFLELLLSGSPTEIRLRDCSWLTAEQFAECFHSCDTGRLEVLQLDQCGRCIPDYALLGPLRQSPWRLPRLVSLSLSGACRLSDKGLHVLVSSAPSLRSINLSQCSLLSSVSVNILAHSLGSLLKELYLDDCLTIDAAQIVPALRKLEHLEVLSLAGIQTVSDEFIGDYITARGHNMKELVLKDCRKLTNASIKVIAEHCPGLCALDLMYLDNLTDLSMGYLTNSCRVLHTLKLCRNQFSDEAIAAFLEIAGESLKELALNNVKKVGHHTALSLASHSKNLHTLDLSWCRKLTDNELGLIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPDIQILGLKMSSLLQNVTVPDACEGPLRYSSVR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1360 660 MobiDBLite consensus disorder prediction 91 126 - -
Pvu3g1360 660 SMART LRR_CC_2 603 636 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 473 498 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 577 602 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 393 418 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 525 549 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 499 524 IPR006553 -
Pvu3g1360 660 SMART LRR_CC_2 367 392 IPR006553 -
Pvu3g1360 660 Gene3D Ribonuclease Inhibitor 271 469 IPR032675 -
Pvu3g1360 660 Gene3D Ribonuclease Inhibitor 550 651 IPR032675 -
Pvu3g1360 660 MobiDBLite consensus disorder prediction 37 67 - -
Pvu3g1360 660 MobiDBLite consensus disorder prediction 204 223 - -
Pvu3g1360 660 MobiDBLite consensus disorder prediction 93 111 - -
Pvu3g1360 660 MobiDBLite consensus disorder prediction 53 67 - -
Pvu3g1360 660 PANTHER UNCHARACTERIZED 164 658 - -
Pvu3g1360 660 PANTHER F-BOX/LRR PROTEIN 164 658 - -
Pvu3g1360 660 SUPERFAMILY RNI-like 312 619 - -
Pvu3g1360 660 MobiDBLite consensus disorder prediction 196 223 - -
Pvu3g1360 660 Gene3D Ribonuclease Inhibitor 470 549 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1360 Pvu-Chr3 32075267 32079649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1360 K15082 - gmx:100798274 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1360 3 32075267 32079649 Pvu3g1360 3 32075267 32079649 ECH
Pvu3g1360 3 32075267 32079649 Pvu9g2352 9 33629095 33634270 PCT