Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2157 ATGGAATATTTTGCGCAATTTGGGTTGTGGGTGATCTTGATCTTGTGCTCATTTCAAATTCAACCCAATTATGGGTTCTACCTTCCGGGTAGTTATCCCCAGAAGCATGGTGTCACGGATGAGTTGTGGGTGAAAGTGAATTCCCTTACTTCCATTGACACAGAGATGCCATTTAGCTATTACAGTTTGCCCTTTTGCAAGCCCGAGGGAGGTATCAAGGACAGTGCTGAGAATCTTGGGGAACTCCTCATGGGGGACAAAATAGAGAACTCTCCTTACAGGTTTAAGATGCGCAACAATGAATCTGAGATTTACTTGTGCCAGGTGGAGGCATTGTCCGGGGATCAGTTAAAGATCTTGAAGGAGAGGATTGACGAGATGTATCAGGTTAATTTGCTTCTTGATAATTTACCTGCTATTAGGTTCACACAGAAAGAAGGGTACTTTATGAGATGGACGGGGTACCCTGTTGGTGTTAAGATTGAGGATGCTTATTATCTGTTTAACCATCTCAAGTTCAATGTTCTTGTCCACAAGTATGAGGAGAATGTGGCTCGAGTAATGGGGACCGGCGAAGGCGTAGAACTGATCCCAGTTGGCAAGGAGGGATCTTCTGAGAAGCCTGGATACATGGTTGTTGGGTTCGAGGTGATTCCTTGCAGTATCATGCATAGTGCTAATTTGGTTAAAAACTTGAAGATGTATGACAAGTATCCGTCGTCTATCCGATGCGATCCGGCCACTGTGGCAATGCCTATCAAAGAGGGTCAGCCTCTTGTTTTCACTTACGAGGTCACCTTTGAGGAGAGTGATATCAAGTGGCCATCTAGATGGGATGCCTACTTAAAGATGGAGGGAGCTAAAGTGCATTGGTTCTCTATCCTTAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTGATCTTCCTGAGGACTGTTAGGAGAGATCTGACCCGTTATGAGGAGCTGGACAAGGAGGCTCAAGCACAGATGAATGAAGAGTTATCTGGTTGGAAGCTTGTTGTGGGAGATGTTTTCCGTGCTCCATCAAATCCTTCTTTGTTGTGTGTGATGGTTGGGGATGGGGTTCAGATTCTTGGTATGTCTATTGTGACAATTTTGTTTGCCGCACTAGGATTCATGTCACCAGCATCTCGCGGAACACTGATCACCGGTATGCTGTTTTTCTACATGATACTTGGTATTGCGGCTGGTTATGTCTCAGTTCGGATGTGGAGGACAATTGGGTTTGGTGATCAGAAGGGCTGGGTTTCGATCGCATGGAAGACTGCGTGTTTCTTCCCAGGAATTTCCTTTTTGATCCTCACAACCTTGAACTTCCTTTTGTGGGGAAGCCACAGCACTGGCGCCATTCCATTTTCACTCTTTGTAATACTAATCTTGCTTTGGTTCAGCATATCTGTTCCCCTTACCCTTGTTGGTGGGTACTTTGGAGCCAAGGCACCCCACATTGAGTATCCAGTCCGAACCAACCAAATTCCTCGTGAAATTCCCGAGCAGAAGTACCCATCATGGCTGTTAGTTCTTGGTGCTGGCACCCTTCCATTTGGCACTTTGTTCATTGAGCTCTTTTTTATCATGTCTAGCATTTGGATGGGTCGAGTTTACTATGTCTTCGGGTTTCTCTTCGTTGTTCTGATCCTTCTTGTGCTGGTTTGTGCTGAGGTATCTCTAGTTCTTACTTACATGCACCTGTGTGTGGAGGATTGGAAATGGTGGTGGAAATCTTTCTTTGCCTCCGGTTCTGTTGCCATGTACATCTTTTTGTACTCCGTTAACTATCTTGTGTTTGATCTCAAGAGTTTGAGTGGTCCTGTGTCTGCAACTCTGTACTTGGGATACTCACTCTTCATGGTCCTAGCAATCATGCTCGCTACAGGCACAGTTGGGTTCCTCTCTTCATTCTGGTTCGTGCATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 1977 0.4512 MEYFAQFGLWVILILCSFQIQPNYGFYLPGSYPQKHGVTDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGIKDSAENLGELLMGDKIENSPYRFKMRNNESEIYLCQVEALSGDQLKILKERIDEMYQVNLLLDNLPAIRFTQKEGYFMRWTGYPVGVKIEDAYYLFNHLKFNVLVHKYEENVARVMGTGEGVELIPVGKEGSSEKPGYMVVGFEVIPCSIMHSANLVKNLKMYDKYPSSIRCDPATVAMPIKEGQPLVFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPSLLCVMVGDGVQILGMSIVTILFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRMWRTIGFGDQKGWVSIAWKTACFFPGISFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFSISVPLTLVGGYFGAKAPHIEYPVRTNQIPREIPEQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFVVLILLVLVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAMYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVHYLFSSVKLD* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2157 658 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 20 658 IPR004240 GO:0016021
Pvu9g2157 658 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 20 658 - -
Pvu9g2157 658 Coils Coil 313 333 - -
Pvu9g2157 658 Pfam Endomembrane protein 70 57 611 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2157 Pvu-Chr9 30917543 30920367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2157 1 658 Miscellaneous Gene Families AT5G35160 83.030 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2157 K17086 - gmx:100819368 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2157 9 30917543 30920367 Pvu9g2157 9 30917543 30920367 ECH
Pvu3g1813 3 38601958 38604495 Pvu9g2157 9 30917543 30920367 PCT