Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1813 ATGTTCTTCCCTCTGCCCTCTGATCTGACGCAAAACCGTCCAAAAATGGAGTCTTTTCGTGGATTTAGAATGTGGGTGTTCTTTTTTATGTGTTTATTGTTTCAATCGGGAAATGGGTTTTACCTCCCGGGTAGTTACCCTCACAAGTATGGCATTGGGGATGAGTTGTGGGTGAAGGTGAATTCTCTCACTTCAATTGACACGGAAATGCCATTTAGTTATTACAGTCTACCTTTTTGTAAGCCTGAGGGTGGTGTGAAGGACAGTGCCGAGAATCTGGGTGAACTCCTTGTGGGGGATCGGATCGAGAACTCGCCCTACAGGTTTAAGATGCACACCAATGAGTCTGAGATGTTTTTGTGTCAACTGGACAAACTCTCCGGTGATCAGTTTAAGATCTTGCAGAAGAGGATTGATGAGATGTATCAGGTTAATTTGATTCTTGATAATTTGCCTGCCATTAGGTTTACCAAGAAGGAGGACTACTTGTTGAGATGGACTGGGTACCCTGTTGGTATCAAGATTCAGGATGTGTATTATCTGTTCAACCATCTGAAGTTTAATGTTCTTGTCCATAAGTACGAGGAGACCAATGTGGCACGTGTTATGGGGACCGGTGATGCGGCTGAAATGATCCCCACGATTGATAAGGAGGGATCTGACAAGCCTGGTTACATGGTTGTTGGGTTTGAGGTGATTCCTTGTAGCATTCTGCACAATGCTGATTCGGTTAAAGGGATGAAGATGTATAACAAATACCCCTCACCGATCAAATGTGATCCGTCCACGGTGGCGATGCCCATCAAGGAGGGGCAGCCGGTGGCATTTACATATGAGGTCACCTTTGAGGAGAGTGATATCAAGTGGCCATCTAGATGGGATGCCTACTTGAAGATGGAGGGGGCCAAAGTTCACTGGTTCTCCATCCTGAATTCGCTTATGGTCATCACTTTTCTGGCTGGTATTGTTCTTGTTATCTTCCTGAGGACGGTTAGGAGGGATCTGACCCGATATGAGGAGCTTGATAAGGAGGCACAGGCACAGATGAACGAGGAATTATCTGGTTGGAAGCTTGTTGTGGGTGATGTTTTCCGCGCACCAACAAATTCTGCTTTGTTGTGTATAATGGTTGGAGATGGAATTCAGATTCTGGGGATGGCTGTTGTGACAATTTTGTTTGCTGCACTTGGATTCATGTCACCAGCCTCTCGCGGAACACTCATAACAGGTATGCTGTTTTTCTACATGATCCTTGGTGTAGCTGCTGGTTATGTTGCAGTTCGGCTGTGGAGGACAATTGGGTGTGGCGATCAAAAGGGATGGATTTCGGTGGCATGGAAGGCTGCTTGTTTCTTCCCCGGTATCGCCTTTTTCATCCTCACAACCTTGAACTTCCTATTGTGGGGAAGCCACAGCACAGGAGCCATTCCATTTTCACTATTTGTTATACTCATTTTGCTCTGGTTCTGCATTTCTGTTCCCCTTACTCTTATCGGTGGCCTCTTTGGAGCAAGAGCACATCACGCTGAGTATCCAGTTCGAACCAATCAAATCCCTCGAGAAATTCCCCAGCAGAAATACCCATCATGGCTTTTGGTTCTCGGTGCTGGCACCCTTCCATTCGGCACCTTGTTCATCGAGCTCTTCTTCATCATGTCCAGCATTTGGATGGGTCGTGTTTACTATGTTTTTGGATTTCTCTTGATTGTTTTGATTCTTCTTGTGGTGGTGTGTGCTGAGGTGTCTCTAGTTCTAACCTACATGCACCTGTGTGTGGAGGATTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTACCTTGTATTTGACCTCAAGAATCTGAATGGGCCTGTTTCTGCAACTCTTTACTTGGGATATTCCTTATTCATGGTTCTTGCAATCATGTTGGCTACAGGCACAGTTGGATTCCTTTCCTCCTTCTGGTTCGTCTATTACCTCTTCTCTTCAGTCAAGTTGGATTGA 2022 0.454 MFFPLPSDLTQNRPKMESFRGFRMWVFFFMCLLFQSGNGFYLPGSYPHKYGIGDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGVKDSAENLGELLVGDRIENSPYRFKMHTNESEMFLCQLDKLSGDQFKILQKRIDEMYQVNLILDNLPAIRFTKKEDYLLRWTGYPVGIKIQDVYYLFNHLKFNVLVHKYEETNVARVMGTGDAAEMIPTIDKEGSDKPGYMVVGFEVIPCSILHNADSVKGMKMYNKYPSPIKCDPSTVAMPIKEGQPVAFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPTNSALLCIMVGDGIQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGCGDQKGWISVAWKAACFFPGIAFFILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGLFGARAHHAEYPVRTNQIPREIPQQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLLIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLNGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1813 673 Pfam Endomembrane protein 70 71 625 IPR004240 GO:0016021
Pvu3g1813 673 Coils Coil 328 348 - -
Pvu3g1813 673 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 20 673 IPR004240 GO:0016021
Pvu3g1813 673 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 20 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1813 Pvu-Chr3 38601958 38604495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1813 16 673 Miscellaneous Gene Families AT5G35160 84.522 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1813 K17086 - gmx:100802084 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1813 3 38601958 38604495 Pvu3g1813 3 38601958 38604495 ECH
Pvu3g1813 3 38601958 38604495 Pvu9g2157 9 30917543 30920367 PCT