Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2140 ATGTTTCGGGTGAGCAACAATCTGATTGGGGTGCTGAATTTGCTCGCATTCCTTCTGTCGATTCCCATTCTGGTGACGGGCGTGTGGTTGAGTAAGCAAGCCAACACGGAGTGCGAATGGTGGCTGGAGAGAGTCTTCATCGTTTTGGGTGTTTTCCTTTTGCTCGTGTCTCTGGCAGGTCTGGTCGGCGCATGTTGTCGTGTCTCATGTCTCCTCTGGCTCTACCTCTTCGTCATGTTCCTCCTCATACTCCTTCTTCTCTCCTTCACCGTCTTCGCCTTCGTTGTCACCAACAAGGGTGCTGGTCAAGTCCTTTCCAACCGAGGCTACAAGGAGTACAGGCTCGGTGACTACTCCAATTGGTTTCAGAACAGAGTCAACAACACTCACACCTGGAACCGAATTCAGAGCTGTCTCCAATCTTCCAAACTCTGCTCCAAATTTCAAACCCAATTCGCCAACGACACTGCTCAACAGTTCTACGCTCAGAACTTGTCCGCGCTTCAGTCCGGGTGTTGCAAGCCATCAGACAGCTGCAACTTTGAGTACCAGGGTCCATCTGTCTGGAATAAGCCTGAAGGTGCAAATTATACCAACTCTGACTGTAATGCTTGGGAGAATGATCCAAATGTTCTGTGCTTCAATTGCCAAACATGCAAGGCTGGGTTCCTACAGAACCTTAAGACTGACTGGAAGAAGGTGACAATTGTGAATGTCATATTCCTCGTCTTCCTCATTATTGTGTACTCTGTTGGTTGCTGTGCATTCCGGAATAACTTGAGAGATAATCGGAAGCACTAG 801 0.4856 MFRVSNNLIGVLNLLAFLLSIPILVTGVWLSKQANTECEWWLERVFIVLGVFLLLVSLAGLVGACCRVSCLLWLYLFVMFLLILLLLSFTVFAFVVTNKGAGQVLSNRGYKEYRLGDYSNWFQNRVNNTHTWNRIQSCLQSSKLCSKFQTQFANDTAQQFYAQNLSALQSGCCKPSDSCNFEYQGPSVWNKPEGANYTNSDCNAWENDPNVLCFNCQTCKAGFLQNLKTDWKKVTIVNVIFLVFLIIVYSVGCCAFRNNLRDNRKH* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2140 266 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Pvu9g2140 266 PANTHER TETRASPANIN-8 1 263 - -
Pvu9g2140 266 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Pvu9g2140 266 PRINTS Transmembrane four family signature 7 30 - -
Pvu9g2140 266 PRINTS Transmembrane four family signature 39 65 - -
Pvu9g2140 266 PRINTS Transmembrane four family signature 66 94 - -
Pvu9g2140 266 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2140 Pvu-Chr9 30695698 30699063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2140 1 261 Miscellaneous Gene Families AT4G28050 62.452 6.32e-125 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2140 - - pvu:PHAVU_009G207500g 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2140 9 30695698 30699063 Pvu9g2140 9 30695698 30699063 ECH
Pvu3g1574 3 35600762 35603366 Pvu9g2140 9 30695698 30699063 PCT