Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1574 ATGGTTCGCTTCAGCAACAACGTTATCGGACTCCTCAATTTCCTCACCTTCCTCCTCTCAATCCCGATCCTGGTGGGCGGAGTGTGGCTGAGCAAGCAGGGCACCACCGAGTGCGAGCGGTGGCTGGAGAAGCCGGTGATCGCGCTCGGCGTTTTTCTGATGATCGTCTCTCTAGCCGGCCTCATCGGCGCGTGCTGTCGCGTGTCGTGGCTCCTCTGGCTCTACCTGCTCGTGATGTTCTTGCTCATCGTTCTTCTCTTCGCCTTCACCATCTTCGCCTTCGTTGTCACAAACAAGGGCGCTGGTGAGACCGTGTCTGGCAGAGGCTATAAGGAGTATAGGCTCGGGGATTACTCCAATTGGTTGCAGAAGAGGGTGAACAACGCTAATACGTGGAATAGGATCAAGAGTTGCTTGCAGTCTGGGAAAGTCTGCACTGAATTCCAGACCAAGTTCCTGAACGACACCGTTAATGAGTTCTACAGCGAGAACCTCTCCGCGATTCAGTCTGGGTGCTGTAAGCCTGCAGATGAGTGCCATTTTACCTATGAGAATTCAACTAGCTGGACAAAGCCCGTAAATGCTACTCTGGACAATCCTGACTGTAGTGCTTGGGATAACAATCCGGACACTCTGTGCTTCAATTGCCAATCATGCAAGGCTGGTTTACTGCAAAACCTGAAGAGTGATTGGAAGAAGGTGGCTATTGTTAACATCGTAGTCCTGGTCTTCCTCATTATTATCTACTCCATAGGCTGTTGTGCTTTCAGGAATAACAGGCAGGAGAATTGGAAGAGATATTAG 804 0.5075 MVRFSNNVIGLLNFLTFLLSIPILVGGVWLSKQGTTECERWLEKPVIALGVFLMIVSLAGLIGACCRVSWLLWLYLLVMFLLIVLLFAFTIFAFVVTNKGAGETVSGRGYKEYRLGDYSNWLQKRVNNANTWNRIKSCLQSGKVCTEFQTKFLNDTVNEFYSENLSAIQSGCCKPADECHFTYENSTSWTKPVNATLDNPDCSAWDNNPDTLCFNCQSCKAGLLQNLKSDWKKVAIVNIVVLVFLIIIYSIGCCAFRNNRQENWKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1574 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Pvu3g1574 267 PANTHER BNAA09G41810D PROTEIN 1 263 - -
Pvu3g1574 267 PRINTS Transmembrane four family signature 7 30 - -
Pvu3g1574 267 PRINTS Transmembrane four family signature 39 65 - -
Pvu3g1574 267 PRINTS Transmembrane four family signature 66 94 - -
Pvu3g1574 267 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Pvu3g1574 267 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1574 Pvu-Chr3 35600762 35603366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1574 1 263 Miscellaneous Gene Families AT2G23810 68.821 7.83e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1574 - - gmx:100819507 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1574 3 35600762 35603366 Pvu3g1574 3 35600762 35603366 ECH
Pvu3g1574 3 35600762 35603366 Pvu9g2140 9 30695698 30699063 PCT