Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2124 ATGTCCGAGACTCAGCAAAGCAATGAGGTGATCATGTTTGAGACACACTTCAACAATGGTGCCAACATGCCTGAAAGTCAGACATGCAATGACGAGGTCATGTTGGAATCTCTGCCTGAAAATGAGTTGGCTGCTGCAGCAGATCCAATCAATCAGCCTTCCCATTGTGAAACTAGTCCTGGTAATCAGTTCACAAATCTCCATATGATTCCTGAAGATCAGCTGCCTCAACCTGAATCTCTGCCTCACTCAGAACTCCTACCCAATTCCCAAATGCCTCACTCTGAATCATTGGTAGATGATCATCTCACAGACATCAAAGTATTATATCACAATCATCTGACCCATTATGAAACACACAATCATCCTAACCATTCCGAGGCTTTATCCCACAATCAACTTTCTAACACTGACGTATTCTCCCATGATCAGCTGGTCAATTCCCAAATGCTATCTCATTATGAGCTGGAAAATAGTGAAACAATGCACCACAATCAGTTAGTCAATTCTCAAGCAAACTATGAAATAGCTATTTCTGATGCCATACCCAGCTACGAGATAATAAGTGCCGAGACACCACTGAACAATGAGGATCATATCTCAGAAACACAGACTCCTAAGCGGAGGAAAAAAAAGTCTATAGTCTGGGAGCACTTCACAATAGAAACAGTAAGTCCTGGATGTAGAAGGGCACGGTGCAAGCAATGTGCTCAAACTTTTGCGTATAGTACAGGTTCAAAAGTTGCTGGCACCAGCCATCTCAAACGCCACATAGCCAAAGGGACCTGCTCAGCTCTTCTACGCAACCATGACCATAATCAATTGGCCTCATATACTGTACGAAATAGGGGAAGTGGGGCTGGAAATGCTAGCAATACACCTAAAAAACGATATAGAACCCCCAGTACCCCTTATGTCATTTTTGATCAAGATCAATGCCGCCATGAGATTGCTAGAATGATTATTATGCATGATTACCCCCTTCACATGGTTGAGCATCCGGGATTTGTTGCATTTGTTCAAAATCTGCAGCCACAGTTCAACATGGTGACCTTTAACTCTATTCAAGGAGATTGTGTTGCAGCTTACCTGATTGAAAAGCATCATCTTTTGAAGTATATTGTGGGATTACCTGGGCGTGTTTGTTTGACACTGGACGTCTGGACATCAAGTCAATCTTTAGGTTATGTATTTATCACAGGATATTTTGTGGATCATGATTGGAAGTTGCAAAGGCGAATTCTCAATGTTGTATTGGAACCATATCCTTATTCAGATTCTGCACTTACCCATGCTGTTGCTGTTTGCCTTTCTGATTGGGGGTTGGAGGGTAGGCTATTTTCTGTCACTTGTAATCAGGCTCTGAGTAATGTTGCCCTTGAAAATCTCAGGCCATTACTTTCTGTGAAGAATCCACATATCCTCAATGGTCAGTTGCTAGTTGGTAATTGCATTGCCCAGACTATAAGCAGTGTTGCAAAGGATTTGTTGGGTTCAGCACAAGACTTGATCAATAAAATCCGTGATAGTGTTAAGTATGTGAAGACGTCAGAATTACATGAGGAAAAATTCTTGGAGCTGAAACAGCATCTTCAGGTTCCTAGTGAAAGGAGCCTTTTTATTGATGACCAAATTAATTGGAATACATCATATCAAATGCTTGTGGCAGCTTCTGAGCTAAAGGAAGTTTTTTCGTGTTTGGACACTTCTGATCCTGATTACAAGGGAGCCCCTTCAATGCAGGACTGGAAGCTGGTTGAAACCCTCTGTAGCTACCTGAAGCCACTTTTTGATGCAGCAAATATTCTTACTTCAACAACTCATCCCACTGTTATCACCTTTTTTCACGAAGTTTGGAAATTGCAACTAGACGCAGCTCGTGCGGTTACGAGTGAAGACCCCTTCATTAACAGCCTTAATAAAATTATGCATGAAAAGATTGATATTTACTGGAGAGAGTGTAGTCTGGTTTTGGCGCTTGCAGTAGTTCTGGATCCCCGTTTTAAGATGAAGCTTGTTGAGTTCAGTTTCACAAAAATCTATGGTGATGATGCTCATTTATATATCAAGACTGTGGAAGATGGAATTCATGAGATGTTTCATGAGTATGTAGCCCTTCCACTGCCACTAACACCTGCATACACTGAAGATGGATGTTCTGGAAACCGTAGTAAGATGGAGGAATCTCAAGGAGATGCAATGTTGTCTGACAATGGTCTGACAGATTTCGATGCCTACATCATGGAAACTTCTAGCCAACAGATGAAATCTGAGCTAGATCAGTACCTTGAAGAATCACTGTTACCGCGTGTTCCAGACTTTGATGTATTAGGTTGGTGGAAGCTAAACAAACTCAAGTACCCTACTCTTTCCAAGATGGCCCGGGATATATTATCTGTTCCGGTTTCTACTGTTGCTCCCGATTCTGTGTTTTATTCAAAAACCAAAGAGATGGATCAGTATAGGAGTTCCTTGAGGCCAGAGACAGTGGAGGCCATTGTATGTTCTAAGGACTGGATGCAGTATGGAACAGCTGAAGCTTCTAATGCGCTTGTGAAAATGGTATTCTAG 2571 0.4185 MSETQQSNEVIMFETHFNNGANMPESQTCNDEVMLESLPENELAAAADPINQPSHCETSPGNQFTNLHMIPEDQLPQPESLPHSELLPNSQMPHSESLVDDHLTDIKVLYHNHLTHYETHNHPNHSEALSHNQLSNTDVFSHDQLVNSQMLSHYELENSETMHHNQLVNSQANYEIAISDAIPSYEIISAETPLNNEDHISETQTPKRRKKKSIVWEHFTIETVSPGCRRARCKQCAQTFAYSTGSKVAGTSHLKRHIAKGTCSALLRNHDHNQLASYTVRNRGSGAGNASNTPKKRYRTPSTPYVIFDQDQCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNSIQGDCVAAYLIEKHHLLKYIVGLPGRVCLTLDVWTSSQSLGYVFITGYFVDHDWKLQRRILNVVLEPYPYSDSALTHAVAVCLSDWGLEGRLFSVTCNQALSNVALENLRPLLSVKNPHILNGQLLVGNCIAQTISSVAKDLLGSAQDLINKIRDSVKYVKTSELHEEKFLELKQHLQVPSERSLFIDDQINWNTSYQMLVAASELKEVFSCLDTSDPDYKGAPSMQDWKLVETLCSYLKPLFDAANILTSTTHPTVITFFHEVWKLQLDAARAVTSEDPFINSLNKIMHEKIDIYWRECSLVLALAVVLDPRFKMKLVEFSFTKIYGDDAHLYIKTVEDGIHEMFHEYVALPLPLTPAYTEDGCSGNRSKMEESQGDAMLSDNGLTDFDAYIMETSSQQMKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTLSKMARDILSVPVSTVAPDSVFYSKTKEMDQYRSSLRPETVEAIVCSKDWMQYGTAEASNALVKMVF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2124 856 PANTHER BED FINGER-RELATED 171 848 IPR045259 -
Pvu9g2124 856 PANTHER - 171 848 - -
Pvu9g2124 856 SUPERFAMILY beta-beta-alpha zinc fingers 213 261 IPR036236 -
Pvu9g2124 856 SUPERFAMILY Ribonuclease H-like 372 841 IPR012337 -
Pvu9g2124 856 Pfam hAT family C-terminal dimerisation region 758 840 IPR008906 GO:0046983
Pvu9g2124 856 Pfam Domain of unknown function (DUF4413) 605 703 IPR025525 GO:0003677
Pvu9g2124 856 ProSiteProfiles Zinc finger BED-type profile. 210 270 IPR003656 GO:0003677
Pvu9g2124 856 SMART bed5 210 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2124 Pvu-Chr9 30440458 30444639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2124 - - gmx:106796566 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1840 3 39011410 39016477 Pvu9g2124 9 30440458 30444639 PCT