Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1840 ATGAGTCTCATCAACTCTCCCACTCGGGTGACGGTTGGTGATGCTAATTACATGGACTGGACTGGCGTTAACAACCACTACAGAACTGCTTACAAAGTCGACGACCAAAAGTCCGTGATGGATGTGGCACTCATTTCAAACATGGATCCTGTAAATATTGGGTTGGGTTGTTCAGAAAAGGCAGGTCCCGTTACTTCCCTGAAGCCCAGAAAGAAAACAATGACATCAGTGTATTTGAAGTTCTTTGAGACAGCTGTTGATGGCAAGACTCGCAGATGCAAGTTTTGTGGACAGAGCTATTCCATTGCAACCGCCACAGGCAATTTGGGAAGGCATCTTGCTAATCGCCATCCAGGTTACGACAAGTCAGGGGACGCTGTCAGCAATTCAGCTGCACGGCCCATTACTGTGGTAAAAAAGTCACAGCCTCAAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCGTTAGGTGGCTTGTTCTAGCCGCTCTCCCTCCTTCAATTCTAGAAGAGAAGTGGCTTGTGAATTCCTATAAGTTTTTGAATCCTTGTATACAACTCTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTCTTCAGAAGCATGAGGGAAGATGTAAGAGCATTGTTGGAACAGGTTTCTTCAAAGTTGTCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATTTACTATATGAGTGTAACATGTCAATGGATCGACGAAAACTGGTGCTTCCAGAAGTTGCTTATTGATATCTGTCGAATACCCTATCCATGTGGGGGTACAGAGATATATCGTTCCCTCGTAAAAGTTCTAAAATTTTACAATATTGAAAGCAGAATTCTGTCCTGTACCCATGATAATAGTACAAGTGCCATGCATGCTTGCCATACTTTGAAAGAGGACTTAGATGGCCAGAAAATAGGGCCTTTCTGTTATATTCCCTGTGCTGCTCGAACTTTGAATGCGATAATAGATGATGGATTGAGATCTGCAAAACAAGTAATTTCTAAGATACGGGAGTTTGTAATAGAGTTAAATGCCTCACCAGTGATCTCTGAGGATTTTATTCAAATATCTACTGCTTATCAAGAAGGCATTTGGAAATTTCCTCTTGATATTTCAGCAAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGCAAGGCAGGTAAATCAGTGGATGCTGTTATTCGAAAATACGAAGAAATGCTGGGCAGTAGGATGCTGCTGGGATCTTCTGACAAAAGTGTGGTTAGCATCATGCATCAATATCTTGAACCATTCTACAAAACCACAAACAACATCTGCACAAGTAAGGTGCCAACTGTTGGGCTTGTGCTTTTCTTCATGGATCACATCTCAGAAACCATTACTTCCTGCAGAGAATCGCGTCACAGCCCAGAATGGCTAAAAAATGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAATTATATCCATCAGGTTTGCAACATATTTACTTATATGACAGCAATTCTAGATCCTCGAATAAAGGGAGAGCTGATCCCTGACAGTTTAAACTCAGAAAGCTTTTTGGTCGAAGCGAAATCCCATTTTATAAGAAATTATTCTACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAAATTGAAGAAGGAGGAAGTGTTTCCTTTGCTGAGGAAATTGCACGCAAGAAGCGAAGGACAACCATGACCTCTGCCACTGATGAGCTTACACAATACCTATCAGAGGCTCCAGCTCTAATACCAACAGATGTTCTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTTATGGCTAGAGATTTCCTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAGCAAAGAATCTGTATGCCACATGACAGCACACAAGCTATTCTTTGTATCAAGTCATGGATTCAGGTTGGCGTCAAGTTTAAGTTTAAATCAACTGAGATAGATTATGAGCGGTTGATGGAATTGGCAGCTGCAGCTGCTGCAACAGATAATAGTCCTGCAAGTTCTGATAAGAAGCAAAAATAA 2109 0.4201 MSLINSPTRVTVGDANYMDWTGVNNHYRTAYKVDDQKSVMDVALISNMDPVNIGLGCSEKAGPVTSLKPRKKTMTSVYLKFFETAVDGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVSNSAARPITVVKKSQPQGKANQVDYDHLNWLLVRWLVLAALPPSILEEKWLVNSYKFLNPCIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKLSITLDFWTSFEQIYYMSVTCQWIDENWCFQKLLIDICRIPYPCGGTEIYRSLVKVLKFYNIESRILSCTHDNSTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNAIIDDGLRSAKQVISKIREFVIELNASPVISEDFIQISTAYQEGIWKFPLDISARWSGNYQMLDLVRKAGKSVDAVIRKYEEMLGSRMLLGSSDKSVVSIMHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETITSCRESRHSPEWLKNAAEEMAKKARNYIHQVCNIFTYMTAILDPRIKGELIPDSLNSESFLVEAKSHFIRNYSTSHFSSMSSGYNAQEIEEGGSVSFAEEIARKKRRTTMTSATDELTQYLSEAPALIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRICMPHDSTQAILCIKSWIQVGVKFKFKSTEIDYERLMELAAAAAATDNSPASSDKKQK* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1840 702 Pfam Domain of unknown function (DUF4413) 445 524 IPR025525 GO:0003677
Pvu3g1840 702 SUPERFAMILY Ribonuclease H-like 209 664 IPR012337 -
Pvu3g1840 702 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 56 672 - -
Pvu3g1840 702 PANTHER BED FINGER-RELATED 56 672 IPR045259 -
Pvu3g1840 702 Pfam hAT family C-terminal dimerisation region 582 662 IPR008906 GO:0046983
Pvu3g1840 702 SMART bed5 73 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1840 - - ahf:112708868 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1840 3 39011410 39016477 Pvu3g1840 3 39011410 39016477 ECH
Pvu3g1840 3 39011410 39016477 Pvu9g2124 9 30440458 30444639 PCT