Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2092 ATGAGGTGGGAAAAGGTAAAGGTTACAGGAGGAGAAGGACCAGGGAAGAGGTGGGGCCACACGTGTAACGCGGTTAGAGATGGCAGACTTCTTTATCTCTTCGGTGGTTACGGCAAATTTAACTGTCAGACCAACCAAGTTCACGTCTTCGACACTCTGAGGCGGATTTGGAGTGAACCAGCTGTTAAAGGGACCCCACCTTCTCCTAGGGACAGCCATAGTTGCTCGGTTGTTGGCGATAATCTTTTTGTGTTTGGGGGTACAGATGGGACCAGGCTGCTGAATGATTTGCACATTCTAGACACTGCTTCACATACATGGATTTTTCCAACTGTGAGAGGGGAAGCACCAGATGCACGGGAGGGTCATGCTTCTGCAGTTATTGGCAAACGACTATTTGTGTTTGGTGGTTGTGGGAGATATTCAAATAATACTGATGATGTGTACTACAATGACCTTTACATATTGAATACAGAAACATATATGTGGATGCGTGCTATAACATCAGGCACTCCACCATCTCCTCGAGATAGCCACACTTGCTCATCTTGGAAAAACAAACTTATTGTGGCAGGTGGTGAAGATGAACAAGATTATTATCTGTCTGATGTTCATGTCCTAGATACTGATACTCTTATCTGGAGCAAAGTGTGTACGTCTAGCCAATCATTGCCACCTCGAGCTGGTCATTGTACAGTTTCTTTCGGCAAATACTTGTTTGTGTTTGGGGGCTTTACGGAAGCTCAAAGCCTATACAACGACTTGTATATGCTTGACATTGAGACTGGTGTGTGGACGAAGGTGGCAACTACACCTAATGGTCCTTCTGCTAGATTTTCTGTTGCTGGTGACTGTTTAGATCCACATATGAGTGGTGTTCTTGTGCTCTTGGGAGGTTGTAATAGAAATCTGGAGGCCCTGGATGATATGTATTACCTATACACAGGGATTGCACGGGAAAGAGATCCCAGACTAGATAAGCTTTCCTTAAGGAAGCAATTGAAGCTGAAATGTCAAGGGCAGAATCTCAATCTTGTCCAAAACCCAATTCTGTGTGGATATGGAGTTAATGCTGATGGTAAACTAAATACCCCAGTAAGGCAACCCATGCATCTGGGACAGAGAGTGTTTCATGCCAAAGTTACGGAAAAAAACTCAACAGGATATACTATTGAAACTGTTATTGATGGAAAGCATCTTCGTGGAATTCTGTTTTCAAACAAGCCAAACATTCTTAGTTCAGTTGCTAATACTTCCAATAGGAAAAGGACTGCTAGTGAAATTGAAACTGTTGCTGCTTCAGATGATATTCTTATGCAATCAAACAATGTAACAACTTCTACAGTGCTCAGGCAAGACAAAAGGGAAGATCAACAGGAATTACGGACAGAGAGTTTAGAATTTCTTGAACGCCATAATGAAGCAGATACTATTGCTGTATCAAGTATCCCGACAACTGCTGCTGAGTCCTTTAAGGTTTCTGTCGACCCGGAACCAGAAGCTAGTTCCTTGAATCTAAACAGTGATGAGAAAAAGGACAGTGGTGAGAAAAATGACGCACCAAAATCCTTAATTGAGAGCTTGGAAAATGATGGATCCAATGATGTGACAAGTTCCAAAGGTGAAATTCAAATTGGTGATCAAATAAATGTGCCATTTTTCAATTGTGAAATTTCAAGACAAACGAGTGATGCACCAAACTGTGATGCTAATATCCTGGAACCTGCAGCAGCGGAAAGTTCTGTTTCTCCGCCAAATCAAGGAATAACTGTGGATTGCGCAACTCCAAGGACAGAAGGCCAAAGTGAAGAAGCAAAATTAACTTGA 1827 0.4247 MRWEKVKVTGGEGPGKRWGHTCNAVRDGRLLYLFGGYGKFNCQTNQVHVFDTLRRIWSEPAVKGTPPSPRDSHSCSVVGDNLFVFGGTDGTRLLNDLHILDTASHTWIFPTVRGEAPDAREGHASAVIGKRLFVFGGCGRYSNNTDDVYYNDLYILNTETYMWMRAITSGTPPSPRDSHTCSSWKNKLIVAGGEDEQDYYLSDVHVLDTDTLIWSKVCTSSQSLPPRAGHCTVSFGKYLFVFGGFTEAQSLYNDLYMLDIETGVWTKVATTPNGPSARFSVAGDCLDPHMSGVLVLLGGCNRNLEALDDMYYLYTGIARERDPRLDKLSLRKQLKLKCQGQNLNLVQNPILCGYGVNADGKLNTPVRQPMHLGQRVFHAKVTEKNSTGYTIETVIDGKHLRGILFSNKPNILSSVANTSNRKRTASEIETVAASDDILMQSNNVTTSTVLRQDKREDQQELRTESLEFLERHNEADTIAVSSIPTTAAESFKVSVDPEPEASSLNLNSDEKKDSGEKNDAPKSLIESLENDGSNDVTSSKGEIQIGDQINVPFFNCEISRQTSDAPNCDANILEPAAAESSVSPPNQGITVDCATPRTEGQSEEAKLT* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2092 608 Pfam Kelch motif 117 160 - -
Pvu9g2092 608 Pfam Kelch motif 69 107 IPR006652 GO:0005515
Pvu9g2092 608 Gene3D - 1 145 IPR015915 GO:0005515
Pvu9g2092 608 Pfam Galactose oxidase, central domain 17 67 - -
Pvu9g2092 608 Pfam Galactose oxidase, central domain 226 273 - -
Pvu9g2092 608 Pfam Galactose oxidase, central domain 175 225 - -
Pvu9g2092 608 Gene3D - 146 367 IPR015915 GO:0005515
Pvu9g2092 608 SUPERFAMILY Galactose oxidase, central domain 221 304 IPR011043 -
Pvu9g2092 608 MobiDBLite consensus disorder prediction 490 520 - -
Pvu9g2092 608 PANTHER KELCH REPEAT DOMAIN 12 425 - -
Pvu9g2092 608 SUPERFAMILY Galactose oxidase, central domain 5 220 IPR011043 -
Pvu9g2092 608 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 12 425 - -
Pvu9g2092 608 MobiDBLite consensus disorder prediction 505 520 - -
Pvu9g2092 608 MobiDBLite consensus disorder prediction 580 597 - -
Pvu9g2092 608 MobiDBLite consensus disorder prediction 564 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2092 Pvu-Chr9 30016556 30022882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2092 44 303 Acyl Lipid Metabolism Gene Families AT3G05420 27.306 6.99e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2092 - - gmx:100785267 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2092 9 30016556 30022882 Pvu9g2092 9 30016556 30022882 ECH
Pvu3g1896 3 39538540 39545385 Pvu9g2092 9 30016556 30022882 PCT