Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2050 ATGGGGACGACGAAGAGCAGCTCCAATTCTACCTCAAAATCTGATAATAATAATAATAACAATGTCAATGGCGACAAGGACAAAAACAACAACACCAGAGTGGTGTTGAATGTCTACGACCTCACCCCTCTCAACAATTATTTGTATTGGTTCGGCTTTGGAATCTTTCACTCAGGCATTGAAGTACACGGTAAAGAGTATGGATTTGGAGCTCATGACTTTCCAGCAAGTGGAGTATTTGAAGTAGAGCCAAAGAAGTGCCCTGGATTTATATACAGATGTTCTGTGACTTTAGGTCATGTAAATATGCATCCTTCTGAGTTTCGAACATTCATTGAGACCATAGCTAATGAGTATCATGGAGATACCTACCACCTTATATCTAAGAACTGCAATCATTTTACGGATGATATGTCACATAGATTGAATGGAAAACGAATCCCAGGTTGGGTGAATCGTCTTGCTAGGTTAGGTTCACTTTGCAGTTGCCTACTTCCTGATTGTGTTGAAGTAACAACTGTTAAACAACTACCGGAATACCATTCAGAAGATGAAATTGCTGAGTCTCTTTCGTCTGCCTCACCATGTGGATCTCAAGCAACATCAGGAATGGACGATGACCAAGAAAAGCACCTTTTGTCACCTTTCGCCAGTAAAACAGATAATGTTTCGTTTGTTAAAGAGGCACCATTAAAATGA 699 0.4006 MGTTKSSSNSTSKSDNNNNNNVNGDKDKNNNTRVVLNVYDLTPLNNYLYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPKKCPGFIYRCSVTLGHVNMHPSEFRTFIETIANEYHGDTYHLISKNCNHFTDDMSHRLNGKRIPGWVNRLARLGSLCSCLLPDCVEVTTVKQLPEYHSEDEIAESLSSASPCGSQATSGMDDDQEKHLLSPFASKTDNVSFVKEAPLK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2050 232 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 22 232 - -
Pvu9g2050 232 SMART DUF862_2a 32 174 IPR008580 GO:0008233
Pvu9g2050 232 MobiDBLite consensus disorder prediction 187 203 - -
Pvu9g2050 232 Pfam PPPDE putative peptidase domain 33 167 IPR008580 GO:0008233
Pvu9g2050 232 ProSiteProfiles PPPDE domain profile. 32 169 IPR008580 GO:0008233
Pvu9g2050 232 PANTHER DESUMOYLATING ISOPEPTIDASE 22 232 IPR008580 GO:0008233
Pvu9g2050 232 MobiDBLite consensus disorder prediction 187 216 - -
Pvu9g2050 232 Gene3D PPPDE domains 26 182 IPR042266 -
Pvu9g2050 232 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2050 Pvu-Chr9 29371304 29373900 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2050 K22763 - gmx:100810582 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2050 9 29371304 29373900 Pvu9g2050 9 29371304 29373900 ECH
Pvu3g1675 3 36984946 36989328 Pvu9g2050 9 29371304 29373900 PCT