Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1675 ATGGGTGTGGAGAATGCCTCGAAGTCCTTTTCCACCTCACAATGCGACGACCAACTTAGCAACAGCAGAATCAACACACTTGTGCGTTTGAATGTCTACGATCTCACCCCTGTCAATAATTACGTCTACTGGGTTGGATTTGGCATATTTCATTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGATTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTCGTATATAGATGTTCCATCACTTTGGGTCAAACCAATATGAGTGCTTCTGAGTTTCGTACATTTATTGAAAACATGGCTTCCGAGTATCATGGGGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGAGGATCTCTCCAATAGATTGACTGGGAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCTTTATGCAGTTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCTGAATACCATGAATGTTCAGAAGATGAATTTGTTGAATCTCTTTCACCTGCCACACCCCGCGAGTCAACAGAAATATATGAGGAGCAAGAAAAACACCTTCTTTCATCATCAACTGTAACTGAGGATGTTACTTTTGTTAGAGAAAGCCAAGCAAAATAA 675 0.4178 MGVENASKSFSTSQCDDQLSNSRINTLVRLNVYDLTPVNNYVYWVGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFVYRCSITLGQTNMSASEFRTFIENMASEYHGDTYHLITKNCNHFTEDLSNRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSPATPRESTEIYEEQEKHLLSSSTVTEDVTFVRESQAK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1675 224 Gene3D PPPDE domains 22 178 IPR042266 -
Pvu3g1675 224 PANTHER DESUMOYLATING ISOPEPTIDASE 16 224 IPR008580 GO:0008233
Pvu3g1675 224 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
Pvu3g1675 224 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 16 224 - -
Pvu3g1675 224 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Pvu3g1675 224 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1675 Pvu-Chr3 36984946 36989328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1675 K22763 - gmx:100778961 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1675 3 36984946 36989328 Pvu3g1675 3 36984946 36989328 ECH
Pvu3g1675 3 36984946 36989328 Pvu9g2050 9 29371304 29373900 PCT