Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2036 ATGCTCAAGCTCCACAATCTTCTTCCATCCTCATCTTCCAAACTCCTCTCCAGCTACATTTTTTCACTCTCCACCAAACTCCCACCACCGCTAACATCACCCTTCTATCGCCAACTCACCACCACCACCACCACCATGTCCATAAACCTACGCACACACGCCTTCGCCGGCAACCCGCTACGATCCAGGACTTCGAACGGGGTCGAACCGTTATCTCCCGCCGCGGCGCACGAGACCTTGAAAACGCGAATTGCGGAGAGCGCGGGCGAGTCCGCCTCGGTGAATTTGAAGGTGTTACCTTTCAGAAACGGGAGGCCCCTGGCGTCTGTGGCTAGCAGTGACACGTGGCGGCTGGCGTGGATGGGGTTGGAGGAAGTGAAGGGGCTCTTGGGCGCGAACCTGAGCGCCGACTCGTTCGTGTATTTGGGGTCCGACGCGGAGGAGGATTCGGTGTACTGGGCGATCGACTTGTCAAGGGAGAGTAGCTTGGTGGCTAAATTTGGTGCCATGAAGCGCTGCTTTGTGGAGCTGAGAACGCTCATGGTTGCTACCGACTGGGTCGATTTGAAGGCCATGGGGAACTTGGCCATCGCTGGTCATGCCAGGGCACTTCTAGAATGGTGTAATATATCACGATTTTGTGGACATTGTGGAGAGAAAACAGTCCCAGTGGAAGCTGGGAGGCGGAAACAGTGTTCAGATGAATCATGCAAAAAGAGGATATATCCACGAGTTGACCCGGTGGTCATTATGCTAGTAATTGATTCAAAGAATGACCGTGCCCTTTTGAGCAAACAATCAAGATTTGTACCTAGAATGTGGAGCTGCTTAGCAGGTTTTATAGAGCCAGGAGAAAGCTTAGAGGAGGCTGTAAGAAGAGAAACATGGGAGGAAGTTGGTATTGAAGTGGGAGAAGTTGTATATCATAGTTCTCAGCCATGGCCTGTTGGACCAAATAGCATGCCATGTCAGCTGATGGTAGGGTTCTTTGCATATGCAAAATCCCTTGAAATAAATGTGGACAAAGAAGAGTTGGAAGATGCTCAATGGCATAGTAGAGAAGAAGTAAGAAAAGCTCTGACATTTGCTGAATACAAGAAAGCCCAAGAAACTGCAGCAGCAAAGGTAGAACAAATGTGCAAGGGAGTAGAAAAGACTCACAGTTTGTCTACAGATTTCAATGTGGAAAGCGGTGAACTTGCTCCAATGTTTGTTCCTGGACCCTTTGCAATTGCTCATCATCTTATATCCTCCTGGGCATTCCCAGATAAAGATGTAAATGGCATTGAATGCCATTCAAAACAACCTAGTGCTTCTATGTCAAATTTGTAG 1332 0.4895 MLKLHNLLPSSSSKLLSSYIFSLSTKLPPPLTSPFYRQLTTTTTTMSINLRTHAFAGNPLRSRTSNGVEPLSPAAAHETLKTRIAESAGESASVNLKVLPFRNGRPLASVASSDTWRLAWMGLEEVKGLLGANLSADSFVYLGSDAEEDSVYWAIDLSRESSLVAKFGAMKRCFVELRTLMVATDWVDLKAMGNLAIAGHARALLEWCNISRFCGHCGEKTVPVEAGRRKQCSDESCKKRIYPRVDPVVIMLVIDSKNDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEEVGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDAQWHSREEVRKALTFAEYKKAQETAAAKVEQMCKGVEKTHSLSTDFNVESGELAPMFVPGPFAIAHHLISSWAFPDKDVNGIECHSKQPSASMSNL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2036 443 CDD NADH_pyrophosphatase 247 420 - -
Pvu9g2036 443 ProSitePatterns Nudix box signature. 279 300 IPR020084 GO:0016787
Pvu9g2036 443 PANTHER NUDIX FAMILY HYDROLASE 46 425 - -
Pvu9g2036 443 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 46 425 - -
Pvu9g2036 443 SUPERFAMILY Nudix 195 370 IPR015797 -
Pvu9g2036 443 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 98 207 IPR015375 GO:0016787
Pvu9g2036 443 Pfam NADH pyrophosphatase zinc ribbon domain 211 242 IPR015376 GO:0016787|GO:0046872
Pvu9g2036 443 Pfam NUDIX domain 247 360 IPR000086 -
Pvu9g2036 443 ProSiteProfiles Nudix hydrolase domain profile. 243 373 IPR000086 -
Pvu9g2036 443 Gene3D - 91 243 - -
Pvu9g2036 443 PRINTS NUDIX hydrolase family signature 274 288 IPR020476 -
Pvu9g2036 443 PRINTS NUDIX hydrolase family signature 288 303 IPR020476 -
Pvu9g2036 443 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 244 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2036 Pvu-Chr9 29180113 29185231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2036 K03426 - gmx:100780473 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1686 3 37086079 37089446 Pvu9g2036 9 29180113 29185231 PCT