Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2027 ATGTTTAATAACCATGCACGTATTGTTTCTTTCCATTTGTTCCTCTTAAATAAAGCAATTTTTCATTCACTTTCTCCATCAAAACCTCGCAATGAGGTCATTTACTGCATACATGGTCTTACGAAGCGTTTTTGCCAAACTAATAATTGGGCTGTTGCTATGAAAACACTTATAGTCTTACATCGTGCCATAAGGGAACTTGACTCCACAGTTTTGGAAGAGTTTGTCAACTATAGTAATGTAAAAGGTTGCATGATTGACTTGACATACTTTCATGAAAAATCGGTCCCAAACGATTACTCTATTTGGATTCGTAATTATGCCCGCTACCTTGAAGAGCGCCTACAATGTTTCGCTGTAATGAACTATGACGCCGCAACAAATAGCTCGAAATATAGTGAAAAGCTTGACACAGTGGAATTATTGGAGCAATTGCCAGCCCTACAGCAGCTACTCTCCAGACTTCTAGATTGCAGTCCAAGGGGTGTAGCTGCAAGTAATCGCTTAATTCTATTTGCTATTTCAATGGTTGCTGGTGAAAGTGTCAAATTATATGTTGCTATAACTGTTAGAGTCGTCGAATTACTTGACAAGTTTTTCGAGATGTACCGTAATGATGCTTGTAGTTCACTTCAAATTTATAAAAAATCAGTGAGTCAGGCAGAAAGGTTAACTGATTTCTTTGAAACTTGCAAAGGATTAGAATTTGGAAGGGGGAAGAAATTCATCAACATTAAAATGCCTCCCTCGTCTTTTATTACTACCATGGAAGAATATATTAAGGAGGCTCCAAGCTCCTTAATGATTGAATACAACATGGACGAGAATGGCGAAGAAGTTATCGAAAACAAAGATGAAGGTGATTTATTGACCATAAATGACGATGTTGTTGAGAAGTCAACAAATGGTTGTAATGAAAATAACATGGCTGTGCCACCACCTGCTGAACTTATGGGTTTGTATGACTTACTAACAGGAGCATCTGAATTTGAAGAGAAATCTCTAATCCCAACTGAAAACAGTTTAAACTCCAATGATGATGAGAATAAGAGAAGCCCAGTACTAGGTTGGGAGCTTGCTCTTTTTAGTGAACCAGAAAATTATAATGCCACTCAGATAGACACTACTCAAGAGGTTGGTGAAATGGAGTTCTGGAAAGATGACAGTGTTAATGATGAGATAAATGCTGACACACAACAAAGTGTAACTCACTTTACTACCCAAGTAAAGTCCAATCCTTTTGACTTCCAGGGTAGTTATGATGAACAATTTAGCATGGCATCTCCAAATTCACACAATGAACTTTCTGCATTTCCTAACATGTCATCAATGGGGGACATGCCTTACCAGCATTTGCAGCAACAACATGAACAACCTTCTATGGCAAATAAAAAATCAACCAATCCCTTTGAAGAAACAAATATGTTGCCTTCAACTATGCCTACACATCCAACTCAAAGTACATAG 1467 0.377 MFNNHARIVSFHLFLLNKAIFHSLSPSKPRNEVIYCIHGLTKRFCQTNNWAVAMKTLIVLHRAIRELDSTVLEEFVNYSNVKGCMIDLTYFHEKSVPNDYSIWIRNYARYLEERLQCFAVMNYDAATNSSKYSEKLDTVELLEQLPALQQLLSRLLDCSPRGVAASNRLILFAISMVAGESVKLYVAITVRVVELLDKFFEMYRNDACSSLQIYKKSVSQAERLTDFFETCKGLEFGRGKKFINIKMPPSSFITTMEEYIKEAPSSLMIEYNMDENGEEVIENKDEGDLLTINDDVVEKSTNGCNENNMAVPPPAELMGLYDLLTGASEFEEKSLIPTENSLNSNDDENKRSPVLGWELALFSEPENYNATQIDTTQEVGEMEFWKDDSVNDEINADTQQSVTHFTTQVKSNPFDFQGSYDEQFSMASPNSHNELSAFPNMSSMGDMPYQHLQQQHEQPSMANKKSTNPFEETNMLPSTMPTHPTQST* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2027 488 PANTHER CLATHRIN ASSEMBLY PROTEIN 18 473 - -
Pvu9g2027 488 Pfam ANTH domain 28 262 IPR011417 GO:0005543
Pvu9g2027 488 SUPERFAMILY ENTH/VHS domain 28 124 IPR008942 -
Pvu9g2027 488 ProSiteProfiles ENTH domain profile. 1 125 IPR013809 -
Pvu9g2027 488 PANTHER CLATHRIN ASSEMBLY PROTEIN 18 473 IPR045192 GO:0048268|GO:0072583
Pvu9g2027 488 SUPERFAMILY GAT-like domain 132 262 - -
Pvu9g2027 488 MobiDBLite consensus disorder prediction 451 488 - -
Pvu9g2027 488 Gene3D ANTH domain 127 285 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu9g2027 488 Gene3D - 15 125 IPR008942 -
Pvu9g2027 488 SMART enth_2 10 125 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2027 Pvu-Chr9 29071120 29081157 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2027 K20043 - rcu:8280399 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1753 3 37973865 37979165 Pvu9g2027 9 29071120 29081157 PCT