Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1753 ATGTCGGGTGGCACGCAGAAGAGTCTGAGAAAGGCACTCGGGGCACTTAAGGACACCACAACAGTCTCATTGGCTAAGGTCAACAGTGATTACAAGGAATTGGACATTTCTATAGTTAGAGCCACAAATCATGTTGAACGTCAAGCGAAGGAAAAACACATACGAGCTATATTTGCAGCTATCTCAGCTACAAGACCTAGAGCCGATGTTGCCTATTGCATCCACGCTCTTGCCCGGCGATTATCAAAGACACATAACTGGGCAGTTGCATTGAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCTACATTTCATGAAGAACTCATTAATTATGGGAGAAGTAGAAGTCATATGCTCAACATGGCTCATTTTAAAGATGATTCCAGTCCAAATGCATGGGATTATTCTTCATGGGTGCGCACTTATGCATTATTTTTGGAGGAAAGGCTGGAATGTTTTCGTGTGTTGAAGTATGACATTGAGGCAGACCGCCCTAGGACCAAAGATTTGGATACCGCAGAACTATTAGAGCAGTTGCCAGCTTTACAACAACTTCTCAATCGAGTTATTGGATGCCAGCCACACGGGGCAGCTGTAAATAACTTTGTCATTCAGTTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGCACAGTCAATATGGTTGACAAGTTTTTTGAGATGCAACGCCATGATGCTCTGAAAGCTCTTGATATATACAGGAGGGTTGGGCAGCAGGCTGAGAGACTTTCAGAGTTTTATGAAATATGCCGAAATCTTGATATTGGACGTGGAGAGAAGTTTATAAAAGTTGAACAGCCCCCTTCATCATTTCTGCAAGCAATGGAAGAGTATGTCAAAGACGCTCCCCAGGGACAAATAGTTCGAAAGGATCTGGCTATTGAAAATAAAGAAGTTTTAGCTATTGAATATAAAAAGACAACAGAAGTGCAAGAGGAACGCCCACCCTCACCTTCACCTTCACCTCCTCCACCTCCTCCTTCTGAACCTGTGAAAGTGGAAGCACCACCAGTACAACCACCACCTGATCTATTGAATTTGGAGGATCCAGTTCCAGCTGCTTTAGAGTTGGAAGAGAAAAATGCATTGGCTTTAGCCATTGTTCCCATTGCTGTTGAACAACAACCTTCTGCTGTTTCAAATCCAACAAATGGAACTACAGGATGGGAATTGGCACTTGTTACTGCTCCTAGTTCAAATGAGAGTGCTGCAGCAGCTAGCAAATTGGCTGGAGGTTTGGACAAGCTTACTTTAGACAGCCTTTACGATGATGCACTCAGGAGAAACACCCAAAGTGTGAGCTATAATCCATGGGAGTCAGCGCCAGCGGGAAACGCGATGCAACCAACAATGCATGATCCATTTTTTGCCTCTACTGCAGTTGCTGCTCCACATTCTGTTCAGATGGCTGCTATGTCCAACCAGCAGCAAGCTTTCATGTATCAGCAGCAGCAGCAGCAAATGATGATGATGGCCCCTCAACAACAATCAGTAAATCCTTTCGGAAATCCTTATGGAGCCACTGTTCACCCCTATGGCTCAGGTATGCCTGTTCAATCATACAATCCATATACAGGTCTAATCTAG 1644 0.4373 MSGGTQKSLRKALGALKDTTTVSLAKVNSDYKELDISIVRATNHVERQAKEKHIRAIFAAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMAHFKDDSSPNAWDYSSWVRTYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQLPALQQLLNRVIGCQPHGAAVNNFVIQLALSMVASESIKIYQAISDGTVNMVDKFFEMQRHDALKALDIYRRVGQQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFLQAMEEYVKDAPQGQIVRKDLAIENKEVLAIEYKKTTEVQEERPPSPSPSPPPPPPSEPVKVEAPPVQPPPDLLNLEDPVPAALELEEKNALALAIVPIAVEQQPSAVSNPTNGTTGWELALVTAPSSNESAAAASKLAGGLDKLTLDSLYDDALRRNTQSVSYNPWESAPAGNAMQPTMHDPFFASTAVAAPHSVQMAAMSNQQQAFMYQQQQQQMMMMAPQQQSVNPFGNPYGATVHPYGSGMPVQSYNPYTGLI* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1753 547 SMART enth_2 32 164 IPR013809 -
Pvu3g1753 547 PANTHER OS06G0175500 PROTEIN 1 527 - -
Pvu3g1753 547 CDD ANTH_N 34 157 - -
Pvu3g1753 547 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Pvu3g1753 547 MobiDBLite consensus disorder prediction 325 366 - -
Pvu3g1753 547 Gene3D ANTH domain 165 318 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu3g1753 547 SUPERFAMILY GAT-like domain 169 300 - -
Pvu3g1753 547 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Pvu3g1753 547 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Pvu3g1753 547 MobiDBLite consensus disorder prediction 334 366 - -
Pvu3g1753 547 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 527 IPR045192 GO:0048268|GO:0072583
Pvu3g1753 547 Gene3D - 7 164 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1753 Pvu-Chr3 37973865 37979165 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1753 K20043 - gmx:100800909 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1753 3 37973865 37979165 Pvu3g1753 3 37973865 37979165 ECH
Pvu3g1753 3 37973865 37979165 Pvu9g2027 9 29071120 29081157 PCT