Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1969 ATGTGCGCCATGAGAGTGTTTACCAAGTCTTTGCATAGCAGCTTCCACGCCAAAATTTGCAAACCCTATCTCACTCTCAATTTCATCACACATCAGCACCACAACCAGTACCAGACCCGTAGAAATCTTATTTTTGACACTTCCGCTTCTGAATTCGTCAAGCTTCATAGACTCACTGGCCCTGATTCCGGGATTGTCGAAATTAGCTTGGATAGGCCTGAAGTAAGAAATGCTGTAGGGAAAGAGATGCTGCGAGGCCTAAGTCATGCTTTTGAGTTGATTAATCAGAACTCTTACGCTAATGTTGCTATAATCAGCAGTTCAGTTCCTGGGGTATTTTGTGCTGGGGCCGATTTAAAGGAGCGCAGGGCCATGAGTCAATCCGAGGCTAAGACTTTTGTGAATTCTATTCGCTCCACATTTTCATTTCTAGAGGTTGTTTGTGTTCCAACTATTGCTGTTATTGAAGGAGTAGCTCTTGGTGGTGGACTTGAGTTGGCTCTTGCATGTGATATTCGAATATGTGGAGAAAATGCTGTGATGGGTTTGCCAGAGACAGGACTTGCAATAATCCCTGCGGCAGGTGGATCTCAGCGACTACCCAGATTGGTTGGAAAAGCAATTGCAAAGGATATTATATTTACTGGTCGAAAGATTGATGGCAAAGAGGCACTGTCCTTGGGTCTTGTTAATTACTGTGTTCCTGCTGGTGAAGCTTATTCAAAGGCACTTGCAGTTGCTCGGGATATCAATCAAAAGGGTCCAGTAGCTATAAGGATGGCTAAAAAAGCTATTAATGAGGGGGTTGAGACTGATCTAACATCAGCTTTGGTCTTGGAAGAAGATTACTATGATCATGTCTTGAATACTAAAGATCGACTAGAAGGCTTGGCTGCATTTGCTGAGAAGCGGAAACCAAGATATACGGGTGAGTGA 936 0.437 MCAMRVFTKSLHSSFHAKICKPYLTLNFITHQHHNQYQTRRNLIFDTSASEFVKLHRLTGPDSGIVEISLDRPEVRNAVGKEMLRGLSHAFELINQNSYANVAIISSSVPGVFCAGADLKERRAMSQSEAKTFVNSIRSTFSFLEVVCVPTIAVIEGVALGGGLELALACDIRICGENAVMGLPETGLAIIPAAGGSQRLPRLVGKAIAKDIIFTGRKIDGKEALSLGLVNYCVPAGEAYSKALAVARDINQKGPVAIRMAKKAINEGVETDLTSALVLEEDYYDHVLNTKDRLEGLAAFAEKRKPRYTGE* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1969 311 SUPERFAMILY ClpP/crotonase 56 310 IPR029045 -
Pvu9g1969 311 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 152 172 IPR018376 GO:0003824
Pvu9g1969 311 Gene3D - 31 252 - -
Pvu9g1969 311 PANTHER ENOYL-COA HYDRATASE-RELATED 40 308 - -
Pvu9g1969 311 Gene3D - 253 311 IPR014748 -
Pvu9g1969 311 CDD crotonase-like 62 250 - -
Pvu9g1969 311 Pfam Enoyl-CoA hydratase/isomerase 63 310 IPR001753 GO:0003824
Pvu9g1969 311 PANTHER FI23914P1-RELATED 40 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1969 Pvu-Chr9 28259768 28263279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1969 34 309 Acyl Lipid Metabolism Gene Families AT1G60550 28.114 3.06e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1969 K05607 - gmx:100306241 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1969 9 28259768 28263279 Pvu3g1760 3 38063134 38070587 PCT