Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1760 ATGGCTGGGAACGATTGGTTGAACAGCTACCTTGAGGCGATACTGGACGTAGGGCCTGGCCTCGACGATTCCAAGTCCTCTCTGCTTCTCAGAGAGAGAGGCAGGTTCAGTCCGACTCGCTACTTCGTCGAAGAGGTTATCGGATTCGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCTTCCTCCACCAGGAGTCCTCAGGAGAGGAACACCAGGTTGGAGAACATGTGCTGGCGGATTTGGAACCTCGCTCGCCAGAAGAAGCAGCTGGAGAGTGAGACGGCGCAGAGATTGAACAAGCGCCGGCTGGAGCGCGAGCGAGGGCGGAGGGAAGCCACCGCGGATATGTCGGAGGACTTGTCGGAAGGAGAGAAGGGAGATCCGGTCAGTGACACGTCAGCTCACGGTGACACCTACAGAGCCAGGATGCCCAGAATCAGTTCCGCCGATGCCATGGAGAGTTGGGCCAACAGTCAGAAAGGGAAGAAGCTCTACATTGTACTCGTTAGCATTCATGGCCTAATACGAGGTGAGAATATGGAGCTAGGACGTGATTCGGATACCGGTGGTCAGGTTAAGTATGTGGTGGAGCTAGCGAGGGCATTGGGCTCAATGCCAGGAGTTTATCGGGTTGATTTGCTAACTAGACAAGTGTCTGCTCCGGATGTGGACTGGAGTTATGGGGAGCCAACCGAAATGTTGACTCCAAGAGACTCGGATGATTTTGGAGATGACATGGGAGAGAGTAGTGGTTCTTATATTGTTCGTATTCCCTTTGGTCCGAGAGATAAATATATTCCGAAAGAACTTCTCTGGCCACACATTCCTGAATTTGTTGACGGAGCACTTAACCACATTATACAGATGTCCAAATCTCTTGGGGAACAGATTGGCAGCGGGCATGCTATCTGGCCAGTTGCCATCCATGGACATTATGCAGATGCAGGTGACTCTGCTGCTCTTTTATCTGGCGCGCTAAATGTTCCTATGCTTTTTACTGGGCACTCGCTTGGCCGAGATAAGTTGGAACAACTTCTAAAGCAAGGTCGACTATCAAGGGATGAAATAAATGCAACTTACAAGATCATGCGTAGGATAGAGGCTGAGGAATTGGCCCTTGATGGTTCTGAAATAGTCATTACAAGCACTAGACAGGAGATAGAAGAACAATGGCGCTTGTATGATGGTTTTGATCCAGTATTGGAGCGTAAAATACGAGCAAGGATCAGGCGTAATGTGAGCTGCTATGGGAGATCCATGCCTCGCATGGCTACAATTCCACCTGGTATGGAGTTCCATCATATTGTTCCACAAGATGGTGATATAGAAGGTGAACCAGAAGGGAATTTGGACCATCCTGCTCCCCAAGATCCACCTATTTGGTCTGAGATAATGCGCTTCTTTACCAACCCTCGCAAGCCTATGATACTTGCCCTTGCTAGACCGGACCCTAAAAAGAACATCACAACTTTGGTAAAAGCATTTGGAGAATGCCGTCCTCTTCAAGAGCTTGCCAACCTTACATTAATTATGGGTAACCGAGATGGAATTGATGAGATGTCTAGCACAAATGCTTCTGTTCTTCTCTCTGTACTTAAGCTGATTGACAAGTATGATCTGTATGGGCAAGTGGCATATCCTAAACATCACAAACAATCGGATGTTCCTGACATATATCGTCTAGCAGCAAAGACAAAGGGTGTTTTCATTAATCCAGCTTTCATTGAGCCATTTGGTCTTACCTTAATTGAGGCAGCTGCTCATGGTTTACCAACTGTTGCTACTAAAAATGGAGGTCCTGTTGATATTGTTAGGGTACTTGATAATGGTCTGCTCATAGATCCCCATGATGAGCAATCTATTGCAGATGCTCTTTTGAAGCTTGTTAGCAACAAGCAACTTTGGGCAAAATGTCGACAGAATGGGTTGAAAAATATTCATTTATTTTCATGGCCTGAGCACTGTAAAACTTACCTGTCTAAAATAGCCACCTGCAAACCAAGGCATCCACAATGGCAGCGAATTGAGGATGGAGGTGAAAGTTCAGAATCAGAATCACCAGGTGATTCCTTGAGAGATATACAAGACTTATCTCTAAACATGAAGTTTTCATTGGATGGTGAGAAGAGTGGGGGTAGCGGAAATGACAATTCTTTGGATTCTGATGGAAATGGTGCTGATAGAAAGGCAAAACTAGAGAATGCTCTTTTGTCATGGTCAAAGGGAATCTCTAAGGACACGCGCAGAGGTGGGGCTACAGAAAAATCAGATCAAAATCCAAATGCTGGTAAATTTCCCCCATTAAGGAGAAGAAAACATCTATTTGTCATTGCTGTGGATTGTGATACCACTTCAGGTCTTCTTGAAACCATTAAAGTCATCTTTGAGTCTGCTGGAAAGGATAGGGCTGAAGGTTCTATAGGGTTCATATTGTCCACATCATTAACAATATCCGAGATACAGTCATTTCTAATCTCAGGTGGCTTGAGTCCCAGCGACTTTGATGCTTATATTTGCAACAGTGGCAGTGATCTCTATTATCCATCCCTCAATCCTGAAGATCGCCCATTTGTGGTTGACTTGTATTACCACTCACACATTGAATACCGTTGGGGCGGAGAAGGGTTGAGGAAAACTTTATTGCGTTGGGCTGATTCAATCACTGATAAGGGAGGGAATAATGAACAAATTGTGAGTCCCGCTGAACAGCTTTCTACTGACTACTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGGCTCCCCCTGTGAAAGAGCTTCGTAAGTTATTAAGGATCCAAGCTCTGCGTTGCCATCCGATATATTGTCAAAATGGGACAAGGCTGAACGTAATTCCAGTGCTGGCATCTCGTTCCCAAGCTCTCAGATACCTGTATGTTCGCTGGGGTTTTGAACTGTCAAAGATTGTAGTGTTCGCTGGAGAATGCGGTGACACGGATTACGAAGGACTTCTGGGAGGCCTACACAAAAGTGTCATACTGAAGGGAGTGGGAAGCAGTGCAATCAGTCAACTCCATAATAACAGAAACTACCCTCTTTCAGATGTCATGCCATTAGACAGCCCCAACATCGTGGAGGCAACTGAGGGTAGCAGCGGTACTGATATTCAAGCTTTGATTGAAAAAGTGGGATATCTCTCTGGATGA 3168 0.4602 MAGNDWLNSYLEAILDVGPGLDDSKSSLLLRERGRFSPTRYFVEEVIGFDETDLYRSWVRASSTRSPQERNTRLENMCWRIWNLARQKKQLESETAQRLNKRRLERERGRREATADMSEDLSEGEKGDPVSDTSAHGDTYRARMPRISSADAMESWANSQKGKKLYIVLVSIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRDSDDFGDDMGESSGSYIVRIPFGPRDKYIPKELLWPHIPEFVDGALNHIIQMSKSLGEQIGSGHAIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINATYKIMRRIEAEELALDGSEIVITSTRQEIEEQWRLYDGFDPVLERKIRARIRRNVSCYGRSMPRMATIPPGMEFHHIVPQDGDIEGEPEGNLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLQELANLTLIMGNRDGIDEMSSTNASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPTVATKNGGPVDIVRVLDNGLLIDPHDEQSIADALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCKTYLSKIATCKPRHPQWQRIEDGGESSESESPGDSLRDIQDLSLNMKFSLDGEKSGGSGNDNSLDSDGNGADRKAKLENALLSWSKGISKDTRRGGATEKSDQNPNAGKFPPLRRRKHLFVIAVDCDTTSGLLETIKVIFESAGKDRAEGSIGFILSTSLTISEIQSFLISGGLSPSDFDAYICNSGSDLYYPSLNPEDRPFVVDLYYHSHIEYRWGGEGLRKTLLRWADSITDKGGNNEQIVSPAEQLSTDYCYAFKVRKPGMAPPVKELRKLLRIQALRCHPIYCQNGTRLNVIPVLASRSQALRYLYVRWGFELSKIVVFAGECGDTDYEGLLGGLHKSVILKGVGSSAISQLHNNRNYPLSDVMPLDSPNIVEATEGSSGTDIQALIEKVGYLSG* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1760 1055 CDD HAD_SPS 775 1004 IPR035659 -
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 93 132 - -
Pvu3g1760 1055 CDD GT4_sucrose_synthase 166 661 - -
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 673 692 - -
Pvu3g1760 1055 PANTHER SUCROSE-PHOSPHATE SYNTHASE 1 1 1052 - -
Pvu3g1760 1055 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 181 661 - -
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 746 767 - -
Pvu3g1760 1055 Pfam Sucrose-6F-phosphate phosphohydrolase 808 1001 IPR006380 -
Pvu3g1760 1055 Gene3D Glycogen Phosphorylase B; 431 651 - -
Pvu3g1760 1055 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1052 IPR044161 GO:0005986|GO:0046524
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 93 138 - -
Pvu3g1760 1055 TIGRFAM sucrsPsyn_pln: sucrose phosphate synthase 1 1050 IPR012819 GO:0005985|GO:0046524
Pvu3g1760 1055 Gene3D Glycogen Phosphorylase B; 167 663 - -
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 673 691 - -
Pvu3g1760 1055 MobiDBLite consensus disorder prediction 706 727 - -
Pvu3g1760 1055 Pfam Glycosyl transferases group 1 470 644 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1760 Pvu-Chr3 38063134 38070587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1760 1 1042 Glycosyltransferase AT5G20280 76.864 0.0 1649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1760 K00696 - gmx:100127429 1993.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1760 3 38063134 38070587 Pvu3g1760 3 38063134 38070587 ECH
Pvu9g1969 9 28259768 28263279 Pvu3g1760 3 38063134 38070587 PCT