Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1893 ATGCCTCAAGCCACAAAGCAAACGCAGAACACAAAGCAGAGGGTCTTCACGTGCTTGACGAAGCTCTCGGACCGCGATACACAAGCAGCAGGAGCCACCGAACTCGAGTCCATCGCTCGTAGCCTGGACCCGCACTCTGTTCCTGTGTTCCTCACCTGCATTCACTCCACCGACGCCTCCGACAAAACCCCTGTCCGCAAGCAATGCGTGCACATCGTAGCCACGCTCTCCCACGCGCACGGCGACGCGCTCTCGCCCTTCCTCTCCAGAATCCTCGCCAACCTCGTGCGTCGCCTGCGCGACCCCGACTCCTCCGTGCGGGCCGCCTGCGCCGATTCCGTCGGCGCTCTATCGGCGCGCGTCACTCGGCAGCCGTTCTCCTCCTTCCTGAAGCCCCTCGCGGAGGCGCTCTTCACAGAGCAGGACCCCAACTCGCAGGCCGCCGCGGCGCTCTGTCTCGCCTCCGCCATCGACGGGGCTCCGGATCCGGACCCCCCCAGGCTTGCCAGGCTGCTCCCGAGATTCGAGAAGCTTCTCAAGAGTAAGATGTTCAGGGCCAAGCCTGCGCTGCTGGCGCTCGTCGGAAGCGTCGTTGAGGCCGGCGGTGCGTCCAGTCGCGGCGCGTTGAGGAATTTGGTTCCCTGCCTTGTGGAGGCGCTCGGCAGCGTCGACTGGGCCACGAGGAAGGGCGCGGCGGAGGCGCTGAGGAAACTCGCTGTTACGGAGAGGAACCTCTTGTCGGAATTCAAGAGTGATTGTTTCAGATTGCTCGAGGATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAAGTTATGAATCAGATGCTGGAGGCGTGGAAGCAGATTCCTGATGTTTCGGATGAGTTTTCTCCACCTCCTCACTCGCAGTCTTCTTCAAAAGAGAATGCAAGTGATGGGCGCTATCCTCCTGTGTCTCAAAATTCATGTAGTCCGGGTTCTGTAATGAGTAAATTGAGGAAGAAATCAAGCCCAATTAGCAAATCAACTCCACCGGATAGATCTCTTGCTGGAAATGCTAAAAAGTTGAGTGCCTTAAGTCGTGACCGGATGAGTTCAGGTGTTTTGCAGAAACTGAACCATAACCATTGGGATGTTAGAATTGCTGTGTCAAATGTTCCTGATCGTGGTGAATGTCGGCTGAGGGATGAAAATGTATTGGAAAGCAGCAAAAAGGATAAAAGCAGATTTTTCAAGTCAGAAACAAAACGGGCTCTGTTTGAGAAAAATTCTGATGACAAGATGCATAAATTTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCAGAAGAGAATGAAGACTCAAGTCCTGTCTGTAATGTAGCAAAGGTTCTTCCTAGGAATGACAAAGAGAGTGAGGAATTATCTTTGATTCGTGCCCAGTTAATTCAAATTGAGAAGCAGCAGTCAAGTCTGTTTGATCTTCTACAGAAATTCATTGGGAGCTCTGAAAATGGAATGCGTTCTTTAGAAACTCGTGTGCATGGCCTCGAGTTGGCATTGGATGATATATCTTATGATTTGGCTGTAACTAGTGGAAGGATAACTAAATCTGATGCTCCCAAGAATGCATGCTGTCTGCTACCCGGTGCCGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACAGATCCGGTATTCATCAAACCGATTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAGTCATAACAGAGCTAATAGGAGCACCGAATCTAGTACGACAAGCCACAGGTTTAGGGTCCGTGGTGATGGAACCTTCATCACAAATCCTCTGGCAGAGATAAAAATTAATTCACGGGAAATTTCAGGCTCTGCAAGATCGGAGCTATCTTGA 1863 0.5153 MPQATKQTQNTKQRVFTCLTKLSDRDTQAAGATELESIARSLDPHSVPVFLTCIHSTDASDKTPVRKQCVHIVATLSHAHGDALSPFLSRILANLVRRLRDPDSSVRAACADSVGALSARVTRQPFSSFLKPLAEALFTEQDPNSQAAAALCLASAIDGAPDPDPPRLARLLPRFEKLLKSKMFRAKPALLALVGSVVEAGGASSRGALRNLVPCLVEALGSVDWATRKGAAEALRKLAVTERNLLSEFKSDCFRLLEDRRFDKVKLVREVMNQMLEAWKQIPDVSDEFSPPPHSQSSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPISKSTPPDRSLAGNAKKLSALSRDRMSSGVLQKLNHNHWDVRIAVSNVPDRGECRLRDENVLESSKKDKSRFFKSETKRALFEKNSDDKMHKFGGSKAGSRVVPCSEENEDSSPVCNVAKVLPRNDKESEELSLIRAQLIQIEKQQSSLFDLLQKFIGSSENGMRSLETRVHGLELALDDISYDLAVTSGRITKSDAPKNACCLLPGAEFLSSKFWKKTQIRYSSNRFSRTGSTPLLASSHNRANRSTESSTTSHRFRVRGDGTFITNPLAEIKINSREISGSARSELS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1893 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Pvu9g1893 620 MobiDBLite consensus disorder prediction 284 355 - -
Pvu9g1893 620 Pfam HEAT repeat 92 118 IPR000357 GO:0005515
Pvu9g1893 620 MobiDBLite consensus disorder prediction 290 340 - -
Pvu9g1893 620 MobiDBLite consensus disorder prediction 565 587 - -
Pvu9g1893 620 Gene3D - 4 379 IPR011989 -
Pvu9g1893 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 614 IPR033337 GO:0005874|GO:0008017
Pvu9g1893 620 Coils Coil 456 476 - -
Pvu9g1893 620 SUPERFAMILY ARM repeat 12 376 IPR016024 -
Pvu9g1893 620 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 6 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1893 Pvu-Chr9 27004191 27008811 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1893 - - gmx:100778310 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1893 9 27004191 27008811 Pvu9g1893 9 27004191 27008811 ECH
Pvu3g2025 3 40873337 40876758 Pvu9g1893 9 27004191 27008811 PCT