Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2025 ATGTCGTCATCACCGCAGAGCGTAAAGCAGAGCGTCTTCGGATGCTTGACCAAACTCTCCGACCGCGACACGCAGTCTCTTGCCGCCGCAGAACTCGAGTCTATCGCTCGGTGTCTCGATGCAGCCACCTTGCCGGCGTTTCTATCGTGCATGTACTCCACTGACGCCTCCGACAAGCCACCGGTCCGCAAGCAATGTGTGCAGCTCCTAGGGTTACTCGCGGAGACGCACGGCAATATGCTTGCGCCGTACCTGTCTAAAATTATCGGCAGCATTGTACGCCGCCTCCGCGACGCGGACTCGTCCGTGCGATCCACGTGCGTGAGTTCGGTTGCGGCATTGTCGCGGCACGTCAGCAGGCAGCCGTTGCATTCGTTCGTGAAGCCGTTGGCGGAGGCGCTTTTCACGGAGCAGGACCAGAACGCGCAGGCCGCCGCGGCGCTGTGTCTCGCCGCCGCTATTGATGGTGCTCCGGATCCGGACCCGGGCAGGCTGTCGAAGCTCCTGCCGCGTTTCGAAAAGCTTCTGAAGCGCGATGGATTCAAGGCGAAGCCCGGGCTGTTGACGCTCGTGGGAAGCGTAATTGCGTCCGGCGGCGCGTCCGGTCACGCGCCGTTGAAGAGCTTGGTTCCGTGCTTGGTAGAGGCGTTGAGCAACGACGATTGGGCCACGCGGAAGGCCGCGGCGGAGACTCTCGTGGTGGTTGCCAACGTAGAGAGGGATTTCTTGTCGGAGTTCAAGACCGAGTGTTTGACAGTTTTTGAGAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGACGTAATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCGGATGAAGTTACGCCACCTGCTAAATCACAATCTTCTTCTAAAGAGAATGCAAGTGATGGACGCTATCCTGCTGTCTCTCAAAATTCATGTAGTCCTGGTTCAGTGATGGCCAATCTGCGGAAGAAAACTACACCTTTTAGCAGATTCAGTCAAACAGATAGTTCTTCTGCTAGTGGTGCCAAGAATAGGAGTGCTTCAAGTGGCAACAACAACAAGAGAACGAGTTCGATTGTTTCCCGAAAACTAAATCATAACAATTGGGATACTCAAGTTGCTGTGGCTGATCAGGGAGATCTTCAGGAGATGGATGGAATTGCTTTGGAAAGGATCAAAATGGATCAAAGCAGATTTACAATGCCAGAAATGAAGGGGGCACTGCTATATAGAGGTTCTGACGATAGAATACACAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCACGAAGAAAGTGAAGACTCAGTTCCTGCCAGTGGTGTCTCTAAAGATCTCCGTAGGAATGACAAAGAGATTGAAGATTTATCGCTGATCCGTGATCAGCTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTGCAGAAATTTATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACGAAATCTGATGTTCATGGCAACACATGTTGCATGCTACCTGGAGCAGAATTTTTAAGCTCCAAATTCTGGAGGAAAACACATGGCCGGCATTCGATCCCACGGATCTCTAGATCAGGTGGCACTCCATCTCTTCCTGCCATGAGCTACCAAGCCGACAAGAATGGTGAAACCAAGTTGACGAGCCATAGATTTAGGCCTGATGGAGGTTTCATCACTAATCCACTGGCAGAGATTCATGCAGATTCGAGGAATTTTGCTACATCGGAGCTAGCTTAA 1839 0.5106 MSSSPQSVKQSVFGCLTKLSDRDTQSLAAAELESIARCLDAATLPAFLSCMYSTDASDKPPVRKQCVQLLGLLAETHGNMLAPYLSKIIGSIVRRLRDADSSVRSTCVSSVAALSRHVSRQPLHSFVKPLAEALFTEQDQNAQAAAALCLAAAIDGAPDPDPGRLSKLLPRFEKLLKRDGFKAKPGLLTLVGSVIASGGASGHAPLKSLVPCLVEALSNDDWATRKAAAETLVVVANVERDFLSEFKTECLTVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVTPPAKSQSSSKENASDGRYPAVSQNSCSPGSVMANLRKKTTPFSRFSQTDSSSASGAKNRSASSGNNNKRTSSIVSRKLNHNNWDTQVAVADQGDLQEMDGIALERIKMDQSRFTMPEMKGALLYRGSDDRIHKYGGSKAGSRVVPYHEESEDSVPASGVSKDLRRNDKEIEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGAEFLSSKFWRKTHGRHSIPRISRSGGTPSLPAMSYQADKNGETKLTSHRFRPDGGFITNPLAEIHADSRNFATSELA* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2025 612 SUPERFAMILY ARM repeat 3 487 IPR016024 -
Pvu3g2025 612 MobiDBLite consensus disorder prediction 423 447 - -
Pvu3g2025 612 MobiDBLite consensus disorder prediction 283 364 - -
Pvu3g2025 612 Pfam HEAT repeat 209 236 IPR000357 GO:0005515
Pvu3g2025 612 Gene3D - 2 376 IPR011989 -
Pvu3g2025 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 607 IPR033337 GO:0005874|GO:0008017
Pvu3g2025 612 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 607 - -
Pvu3g2025 612 MobiDBLite consensus disorder prediction 287 364 - -
Pvu3g2025 612 SMART TOG_3 31 263 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2025 Pvu-Chr3 40873337 40876758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2025 - - gmx:100789197 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2025 3 40873337 40876758 Pvu9g1893 9 27004191 27008811 PCT