Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1843 ATGGTATTCATTCCAATTTGTGAATCTGGATGTTTCTCTCCAAAACAAGCAGCGCCCAACACTCTCACTCTCTCCCTCTCTTCACCGCCCATCGCAAACCAAACTAAACCAAACAACACAACACAAAACCAAACAAAACCACTTACATCTAAATACTATAATAATAACAAGCATGTTTCTTCTTCTTTCCACTTTTCTTCATATTTTCCATCACTTGCTAAAACTCACACTTCTTTTCTACCTTCTTCATCGGATACTACTATGGAACAAATTGCACTCTCTCAACAGGAGGAAGATTTGCTTGTTTCAGATTGCGAGAGCATTGTTTCCGGCACTGAAACCACTGAAACAATGAGACAAGAAGACGCTTCTTTCGTTAGGCTTCCAGAAGGTGATGTGCTTCACGATCTTATCAAGAGAGGCTTTGTTCGTGGGCTGGGCCATCTCGGGCCCAAAACGGAGGTTCTTTCCATTCACCGAAACACCTGTTCTGGCGCGGTTTCGCAGGCGCGGCTCCAGTCGTTTCAGCTTCACGCTAGGGCGGTGGCCAAGCTACGTGAAGGAAATTCCAATGTGAAGTACGCTTGGTACGGAACTCGCGGCGAAGACGACATAAACGACATCGTTTCTCACGGATTTGCCCACGTTCACGGCCCTCAACTACTTCTCTCCCCCGATGACGCTCCTCTCCAAAGTGTTAGAGGGTGCGTGGTTGGGAAAGACGGTGTGAGGCATGTACTACTGTGCCGCGTTATTCTGGGGAGATCGGAGCTTGTTGATGGTGGCACAGAACAATGTTATCCCAGTTCCCAGAACTATGATTCTGGGGTGGATAGTTTTTCAGCTCCTAGCAAGTACATAATTTGGAGTAACCGCATGAACACTCATGTCTTGCCTGCATATGTTATAAGCTTCAGGGTTCCTTCTTTCAAAGGGATTGAGAAGAAGAGTGAAGAACTACTGAGACCTAGTTCCCCTTGGATGCCATTCCCAACTCTGATTTCTGTGCTTTCAAAGGTTTTGGCTTCTCGTGATATTGCTCTCATCTCCAAGTTTTACAAGGATAAAAAAGATAAGAAGATTTCACGACATGAACTTATACAAAGAGTGAGACAAATAGCAGGGGACAAGTTACTGTTTGCAGTCATCAAATCTTACAGAGAAAAGAAGAAACAAAGATTTCAACATACAAGGTCAAAGAATGGGCAAGCAACGACACATGAGTTCTAA 1230 0.4455 MVFIPICESGCFSPKQAAPNTLTLSLSSPPIANQTKPNNTTQNQTKPLTSKYYNNNKHVSSSFHFSSYFPSLAKTHTSFLPSSSDTTMEQIALSQQEEDLLVSDCESIVSGTETTETMRQEDASFVRLPEGDVLHDLIKRGFVRGLGHLGPKTEVLSIHRNTCSGAVSQARLQSFQLHARAVAKLREGNSNVKYAWYGTRGEDDINDIVSHGFAHVHGPQLLLSPDDAPLQSVRGCVVGKDGVRHVLLCRVILGRSELVDGGTEQCYPSSQNYDSGVDSFSAPSKYIIWSNRMNTHVLPAYVISFRVPSFKGIEKKSEELLRPSSPWMPFPTLISVLSKVLASRDIALISKFYKDKKDKKISRHELIQRVRQIAGDKLLFAVIKSYREKKKQRFQHTRSKNGQATTHEF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1843 409 ProSiteProfiles PARP catalytic domain profile. 112 325 IPR012317 GO:0003950
Pvu9g1843 409 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 94 398 - -
Pvu9g1843 409 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 94 398 IPR044964 -
Pvu9g1843 409 ProSiteProfiles RST domain profile. 321 392 IPR022003 -
Pvu9g1843 409 Pfam RCD1-SRO-TAF4 (RST) plant domain 322 387 IPR022003 -
Pvu9g1843 409 Gene3D - 124 307 - -
Pvu9g1843 409 SUPERFAMILY ADP-ribosylation 125 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1843 Pvu-Chr9 26168147 26171059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1843 - - pvu:PHAVU_009G178500g 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1843 9 26168147 26171059 Pvu9g1843 9 26168147 26171059 ECH
Pvu3g2071 3 41392928 41396643 Pvu9g1843 9 26168147 26171059 PCT