Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2071 ATGGACCGACCAATTCATCATTCATCCGACACACCTACATATGATTCCGATGAAGACTCACTCGTTTCTGATTGCGAGAGCGGGGTTTCCGGGGCCGAGGGGACGTTTTCCGGAGCCTTTGTACCGGCGCCCGAAGACGGCTGTCGCGTCCACACTAGATTTGTCCGTAGCTTGACCGTTAACGGGTTGAGGCCCGAGGTGGTGACGATTGCCAAGAACGCGCATTCCTCTGTCATGGCAAGAGCGCGTGCTCAGTGCTTTCAGGTTTTCGCGCGTGCGGCGGGGGAATTGCACGAGGGTCAGGCCAACGTCAGGTTGGCTTGGTACGGTGCGTCCGGTAAGGAAGAGATAGCTGATATCGCCCAACATGGTTTCGGCCACGCGCACTGTAACGGCCTGCGTCTCTCTCCACTGGATTACCCACTCCAAAGTGTGAAGAGCTCTGGTGTAGACAGTGACGGCGTGAGGTACTTGTTGCTGTGTAGCGTTATCTTGGGGAAGACGGAGGTGGTGCCACGTGGCTCTAATCAACGCCGTTCGAGTTCTGAAGAGTATGATTCTGGGGTGGACGATCTTTTGGCTCCCAAGGAGTATGTTATTTGGTGTAACCGGCTCAACACTCATGTTTTGCCTGAATATGTTTTGAGTTTCACGCTTCCTTCCTTAAAAGGGAATGTAAATATTAGGGAACCTTTGAGGCCCTCTTCGCCGTGGATGCCATTCCCGGCTTTGATTTCGGTGCTTTCGAGGATTTTGCCTCCTGCTGAAGTTGCCACCATTGTAAAGATACGCAAAGATTATACAGAACTGAGGATTTCTCGATATGAGATGATACAGAGGGTGAGAAATATAGCAGGCGACAAATTGCTAATTTCCATCATCAAATCTTTCAGAGCCAAGAAAACACCTGCAAACTTTAAAGCAAACAAGGGGAAAGAAGGGCAAGGGGAAAGAAGAGTAAGGGGACAGCCAGTAGCATGA 981 0.5087 MDRPIHHSSDTPTYDSDEDSLVSDCESGVSGAEGTFSGAFVPAPEDGCRVHTRFVRSLTVNGLRPEVVTIAKNAHSSVMARARAQCFQVFARAAGELHEGQANVRLAWYGASGKEEIADIAQHGFGHAHCNGLRLSPLDYPLQSVKSSGVDSDGVRYLLLCSVILGKTEVVPRGSNQRRSSSEEYDSGVDDLLAPKEYVIWCNRLNTHVLPEYVLSFTLPSLKGNVNIREPLRPSSPWMPFPALISVLSRILPPAEVATIVKIRKDYTELRISRYEMIQRVRNIAGDKLLISIIKSFRAKKTPANFKANKGKEGQGERRVRGQPVA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2071 326 SUPERFAMILY ADP-ribosylation 73 218 - -
Pvu3g2071 326 Gene3D - 43 218 - -
Pvu3g2071 326 Pfam RCD1-SRO-TAF4 (RST) plant domain 233 298 IPR022003 -
Pvu3g2071 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 15 309 - -
Pvu3g2071 326 MobiDBLite consensus disorder prediction 305 326 - -
Pvu3g2071 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 15 309 IPR044964 -
Pvu3g2071 326 ProSiteProfiles PARP catalytic domain profile. 1 238 IPR012317 GO:0003950
Pvu3g2071 326 ProSiteProfiles RST domain profile. 232 303 IPR022003 -
Pvu3g2071 326 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2071 Pvu-Chr3 41392928 41396643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2071 - - gmx:100784311 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2071 3 41392928 41396643 Pvu9g1843 9 26168147 26171059 PCT