Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1839 ATGCTGAGAATCGCTTCAAGCGCAAAGAGACTTCTTCGAACGCCGTCGTTCGAGGCGCCACCGTTGGGGGTTAGGGTTCTGCCGCGCCTCTACCACGAGAGGGTGGTGGACCACTACGACAACCCCCGAAATGTCGGATCCTTCGACAAGAACGACCCCGCTGTGGGAACGGGTCTTGTCGGAGCACCCGCGTGTGGCGACGTAATGAAACTCCAAATTAAGGTTGACGAGAAAACCGGAAAGATCGTCGATGCTCGCTTCAAAACCTTCGGTTGTGGATCCGCCATTGCTTCTTCCTCCGTCGCTACTGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTGTCGATTAAAAACACTGAAATTGCGAAGCATCTTTCACTTCCACCCGTCAAGCTTCACTGCAGCATGCTTGCAGAGGATGCTATAAAAGCAGCCGTTAAAGATTATGAAACTAAACGTGCCTCAGCAATTGCTGATGGACAGGGAACAGGAGAGAAAGCTGCCACTGCTTGA 516 0.5174 MLRIASSAKRLLRTPSFEAPPLGVRVLPRLYHERVVDHYDNPRNVGSFDKNDPAVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETKRASAIADGQGTGEKAATA* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1839 171 SUPERFAMILY SufE/NifU 30 154 - -
Pvu9g1839 171 CDD IscU_like 30 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pvu9g1839 171 Gene3D - 30 169 - -
Pvu9g1839 171 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 1 159 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pvu9g1839 171 TIGRFAM iscU: FeS cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Pvu9g1839 171 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1839 Pvu-Chr9 26049419 26051150 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1839 K22068 - gmx:100806169 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1839 9 26049419 26051150 Pvu9g1839 9 26049419 26051150 ECH
Pvu3g2076 3 41451404 41453664 Pvu9g1839 9 26049419 26051150 PCT