Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2076 ATGCTGAGAATAAGCGCAAATAGGGTTTTGGGAACGACGTCGTTAGGCGTTAGGGTTCCGGCGCGGTTGTACCACGAGAGGGTCGTGGATCATTACGACAATCCCCGCAATGTTGGATCGTTCGACAAGAACGACCCGAGCGTGGGGACGGGTTTGGTGGGGGCACCGGCGTGCGGCGATGTCATGAAGCTCCAGATTAAGGTCGACGACAAAACCGGAAAAATTGTCGATGCTCGATTCAAGACTTTTGGGTGTGGCTCTGCTATTGCTTCTTCCTCCGTCGCTACTGAGTGGGTGAAGGGAAAGCAAATGGAGGAAGTTCTGTCCATAAAAAATACTGAGATTGCAAAGCATCTTTCACTTCCACCAGTTAAGCTCCACTGCAGCATGCTTGCTGAAGATGCCATTAAAGCGGCAGTTAAGGACTATGAAGCTAAGCGTGCCATGGCAACTGCTAGCGGAAAGGCAGCAACAGAAGAGATGCCAGCCACTGCATGA 498 0.5141 MLRISANRVLGTTSLGVRVPARLYHERVVDHYDNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAMATASGKAATEEMPATA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2076 165 Pfam NifU-like N terminal domain 24 148 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pvu3g2076 165 Gene3D - 23 164 - -
Pvu3g2076 165 CDD IscU_like 23 139 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pvu3g2076 165 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 16 162 IPR002871 GO:0005506|GO:0016226|GO:0051536
Pvu3g2076 165 TIGRFAM iscU: FeS cluster assembly scaffold IscU 24 147 IPR011339 GO:0005506|GO:0016226|GO:0051536
Pvu3g2076 165 SUPERFAMILY SufE/NifU 23 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2076 Pvu-Chr3 41451404 41453664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2076 K22068 - gmx:100526856 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2076 3 41451404 41453664 Pvu9g1839 9 26049419 26051150 PCT