Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1832 ATGATGCAGTCGTTGTTGAGCGCGAAGACATGCGTGGGTATGCTGTCACCGGTTATAACGAACTCCGAAGAAAGGAGTAGGAGGAGGATGATGCAGAGAGTGAATTGTAGAAACAGTAGGAATTGGAGGAATGTGGCTGTGTCGTGCGGTTCGGGGAAGAACGGGAACGAGGGAATTGGCGCGAGTGAAGGGTGGAATTCGGGTTCGTTTTTGTCTCCTAGTCACAATTACGCGATCTTGAAGCACCGGATGGAGATAGCGGCGAAGTCCGAGTTTTATGAAGAGGCTGCAAGGATTCGTGACTCGCTCAAATGCTTCGAGGACGAGGTTCCTGTTCTGCGTCTGCGGAGGTTGTTGAAAGAAGCTGTTGCTGATGAGAGATTTCAGGATGCAGCTAAATATCGTGATCAGCTCAAAGAAATTGCTCCACATTCTCTCTTAAAATGTTCAAGTGATTGTACAACCTTGGGAATTCGAGTACAAGTTAAGAGTGTATATTTAGAGGGCAGAAGTGAATCAACAGCAGAGGAGGTATATTTCTTTGAATATAAAATAAGAATTACTAATAACACAAACCGCCCTGTTCAGCTCCTCAGAAGGCACTGGATTATAACCGATGCTAATGGAAAAACTGAAAATTTCTGGGGAATTGGGGTTGGTGGTGAACAGCCAGCTATATTTCCTAAGAGTAGTTTTGAATTCTCTTCTACATGCCCTTTAAACGCACAAAATGGTAGAATGGAAGGTAACTTTGAGCTGATACACGTTGATCGAGTAGGTCCAAGAGCATTTAGCGTGGACGTTGCCCCTTTTTCTCTCTCTCTACTTGGAGATGGTGATGATGGTGAAATTATCTGA 858 0.4452 MMQSLLSAKTCVGMLSPVITNSEERSRRRMMQRVNCRNSRNWRNVAVSCGSGKNGNEGIGASEGWNSGSFLSPSHNYAILKHRMEIAAKSEFYEEAARIRDSLKCFEDEVPVLRLRRLLKEAVADERFQDAAKYRDQLKEIAPHSLLKCSSDCTTLGIRVQVKSVYLEGRSESTAEEVYFFEYKIRITNNTNRPVQLLRRHWIITDANGKTENFWGIGVGGEQPAIFPKSSFEFSSTCPLNAQNGRMEGNFELIHVDRVGPRAFSVDVAPFSLSLLGDGDDGEII* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1832 285 ProSiteProfiles UVR domain profile. 109 144 IPR001943 GO:0005515
Pvu9g1832 285 Pfam UvrB/uvrC motif 114 141 IPR001943 GO:0005515
Pvu9g1832 285 Gene3D ApaG domain 148 278 IPR036767 -
Pvu9g1832 285 PANTHER OS05G0170800 PROTEIN 24 280 - -
Pvu9g1832 285 ProSiteProfiles ApaG domain profile. 152 280 IPR007474 -
Pvu9g1832 285 SUPERFAMILY ApaG-like 154 274 IPR036767 -
Pvu9g1832 285 Pfam ApaG domain 172 253 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1832 Pvu-Chr9 25933065 25935727 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1832 - K06195 gmx:100799029 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1832 9 25933065 25935727 Pvu9g1832 9 25933065 25935727 ECH
Pvu3g2081 3 41512511 41517990 Pvu9g1832 9 25933065 25935727 PCT