Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2081 ATGCAATCGTTGAGTATGAGTCTGAGGAGTAGTAGTTCAGCAAATTTACTGTTGCTGGGTTCGGAGGCGAGAGTGAGAAGAAGAAGCAGAACTGTGATAGTAGCGTGTAATTCGCAGGGAGAGAGTGGTAGCAGTAGCACCAGCTCCTTTCTCTCTCGCACCCAAACCTACGCTCTTCTTAAGCAACAATTGCAAGTAGCTGCTAAATCTGAGAATTACAAGGAAGCTGCTAGAATTCGAGATTCTTTGAAATTGTTTGAGGAGGAGGAGCCTGTATTGCGTCTGAGGAGACTATTGAAGGAAGCAATTGCGGAAGAGAGATTCCAGGATGCTGCTAGATATCGTGATGAGCTAAACAAAATTGCCCCACACTCTCTTTTAAAATGCTGCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGTTATACTTCTTTGCATATAGAATAAGAATTACCAATGACTCGGACCAACCTGTTCAACTCCTTAGAAGGCATTGGATTATAACGGATGCTAATGGGAAGATGGAAAACGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCGTTGATACTTCCTGGAAATAGTTTTGAATACTCTTCGGCATGCCCACTGAACACACCTAATGGTAGAATGGAAGGTGACTATGAAATGATACATGTTGAAAGAGTAGGCTCACGATCATTCAATGTGGCCATTGCTCCGTTTTCTCTCTCTCTTCTTGGAGACGATGAAGGTTGTAATATTTGA 792 0.4318 MQSLSMSLRSSSSANLLLLGSEARVRRRSRTVIVACNSQGESGSSSTSSFLSRTQTYALLKQQLQVAAKSENYKEAARIRDSLKLFEEEEPVLRLRRLLKEAIAEERFQDAARYRDELNKIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNDSDQPVQLLRRHWIITDANGKMENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHVERVGSRSFNVAIAPFSLSLLGDDEGCNI* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2081 263 PANTHER OS05G0170800 PROTEIN 38 259 - -
Pvu3g2081 263 Pfam ApaG domain 150 233 IPR007474 -
Pvu3g2081 263 ProSiteProfiles UVR domain profile. 54 89 IPR001943 GO:0005515
Pvu3g2081 263 SUPERFAMILY ApaG-like 134 253 IPR036767 -
Pvu3g2081 263 ProSiteProfiles ApaG domain profile. 132 259 IPR007474 -
Pvu3g2081 263 Gene3D ApaG domain 128 258 IPR036767 -
Pvu3g2081 263 ProSiteProfiles UVR domain profile. 89 124 IPR001943 GO:0005515
Pvu3g2081 263 Hamap Protein ApaG [apaG]. 131 262 IPR023065 -
Pvu3g2081 263 Pfam UvrB/uvrC motif 94 121 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2081 Pvu-Chr3 41512511 41517990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2081 - K06195 gmx:100784413 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2081 3 41512511 41517990 Pvu3g2081 3 41512511 41517990 ECH
Pvu3g2081 3 41512511 41517990 Pvu9g1832 9 25933065 25935727 PCT