Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1817 ATGGGAATGAAAAGACATTCAGAAGATAGCAATGATCCATTTTTTGTTGCAGCTCACAACACAACAACAAGACAACAATGCACACAACCAGACAATGATGGTGTCCCAGAACAGACATGTGCACAACAAAACCATTCTCCAAAATTGGCTTCTTTCACTTCCCAAAATGCTCCACCTGTGATACCTTCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAGCAATGTGCCACCCCATGCAGGGCAACCACACTTTTAGGCCACCTCATGAACTGCTCAAGTTGAGGAGAGTCAGAGCTCACTTGAAGAGGATTAACAAGCCTCCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTATTATCTCACCAGCAGCCAGCTTTTGACCATCCAAAGCTTAGAGGGCACACACCATTGGATCCACCAGAGAGGCCAAGGGAGAAAAACCAGACCAAAGTAGATAGGGAAAGTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAACATGCCCAGAAGGAACTGTACCAATCAGAAGAACAACAGAGGAGGATATTCTTAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGAGCTGTACGGAGAGACTCATCTGGCAGTGGTCATGAGCATGCTGTTGTTTTTGTAAATGGGGATCAGTACTATGGAGCAAGGGCAAGCATAAACGTGTGGGCACCAAGTGTAAGTGATGAATTTGAATTCAGCTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTGAACACCATAGAAGCTGGTTGGCAGGTGAGTCCACAACTGTATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACAACTGATGCATATCAAACAACTGGGTGCTACAATTTACTCTGTTCAGGCTTTATCCAAACCAACAATAGGGTAGCAATAGGAGCAGCAATCTCCCCAAGATCTGCTTACAACAGAAGACAATTTGATATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGACATTGGTGGTTGGAGTTTGGATCAGGTGTGCTAGTAGGGTATTGGCCAGCAAACATGTTCAGTCACTTGAGGAGTCATGCAAGCATGGTGCAATTTGGAGGAGAAATAGTGAACAGTCGTTCAAGGGGATACCACACTGCCACCCAAATGGGGAGTGGACATTTTGCTGAAGAAGGGTTCAGAAAAGCAGCATATTTTAGAAACTTGCAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAACATTCATCACTTGGCTGATCATTCCAATTGCTACAACATAAGGCAAGGAACCAGCAATGCTTGGGGAACTTACTTTTACTATGGAGGCCCTGGAAGGAATGTGGGATGCCCATGA 1395 0.4437 MGMKRHSEDSNDPFFVAAHNTTTRQQCTQPDNDGVPEQTCAQQNHSPKLASFTSQNAPPVIPSFVALLLLVTSIAPAMCHPMQGNHTFRPPHELLKLRRVRAHLKRINKPPVKTIQSPDGDLIDCVLSHQQPAFDHPKLRGHTPLDPPERPREKNQTKVDRESESFQLWSDSGETCPEGTVPIRRTTEEDILRASSIRRFGRKPRAVRRDSSGSGHEHAVVFVNGDQYYGARASINVWAPSVSDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRVAIGAAISPRSAYNRRQFDIGLMIWKDPKHGHWWLEFGSGVLVGYWPANMFSHLRSHASMVQFGGEIVNSRSRGYHTATQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLRNIHHLADHSNCYNIRQGTSNAWGTYFYYGGPGRNVGCP* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1817 464 Pfam Neprosin activation peptide 114 221 IPR025521 -
Pvu9g1817 464 Gene3D - 240 351 - -
Pvu9g1817 464 PANTHER CARBOXYL-TERMINAL PEPTIDASE 40 464 - -
Pvu9g1817 464 Pfam Neprosin 247 457 IPR004314 -
Pvu9g1817 464 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 40 464 - -
Pvu9g1817 464 MobiDBLite consensus disorder prediction 135 167 - -
Pvu9g1817 464 MobiDBLite consensus disorder prediction 133 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1817 Pvu-Chr9 25658278 25664112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1817 - - gmx:100777828 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2096 3 41678162 41681991 Pvu9g1817 9 25658278 25664112 ECH
Pvu9g1817 9 25658278 25664112 Pvu9g1817 9 25658278 25664112 ECH
Pvu3g2096 3 41678162 41681991 Pvu9g1817 9 25658278 25664112 PCT