Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2096 ATGGACATGAAGGCATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATATTTTGCAGTTCCTCACACAAGAAGACAACAACAGTGCATACAAGCAAATCATGATACCCCAGAAGAAACAACTTCACTAAATCATTCCCTGAAATTGGCGCTTTCCACTTCCCAAAACACTCTACTGCCTACGCTACCTGCCTTTGTTGTTTTGCTACTACTTGTTACTTCAATTGGCACATCATTTTCTCACCCCATTGCCTCCAATTCACCTTTGCCACCACCCTCTCACCCCACTGCTAACCATACTTTCAGACCAGCTCCAGTGTCGCAAAAGTTCAGGACAATCAGAGCTCACCTCAAGAAGATTAACAAGCCACCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATAGACTGTGTTTTCTCTCATCACCAGCCTGCTTTTGACCATCCTTTGCTCAGAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGCCACCACAATGGAGAAACAGTCACAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAATATGCCCTGAAGGAACTGTTCCGATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCTATCAGAAGATTTGGAAGAAAAGTACGGAGGGACTCAACTGGCACTGGTCATGAGCATGCAGTTGTTTTTGTAAACGGAGATCAATACTATGGAGCAAAAGCGAACATAAATGTATGGACACCCAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCTTTTGGCAATGATCTGAATACCATAGAGGCTGGATGGCAGGTAAGTCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACTGGATGCTACAATTTACTATGTTCAGGATTTGTCCAAACTAACAACAGGATAGCAATAGGGGCTGCAATCTCCCCAAGATCCATCTATAATAACAGACAATTTGATATTGGCTTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAATTTGGGTCGGGGCTACTTGTTGGGTACTGGCCAGCATTCTTGTTTAGCCACTTGAGAAACCATGCTAGCATGGTACAATTTGGAGGAGAAATAGTGAATTCTCGTTCAAGGGGCTACCATACTGGCACTCAAATGGGTAGTGGCCATTTTGCAGAAGAAGGATTTAGAAAAGCAGCCTACTTTAGAAACTTACAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTTTCAAATATTCACCAACTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTCTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAATGTGAGATGTCCATGA 1422 0.4318 MDMKAYSVSWTKHKKEPYFAVPHTRRQQQCIQANHDTPEETTSLNHSLKLALSTSQNTLLPTLPAFVVLLLLVTSIGTSFSHPIASNSPLPPPSHPTANHTFRPAPVSQKFRTIRAHLKKINKPPVKTIKSPDGDLIDCVFSHHQPAFDHPLLRGQRPLDPPERPKGHHNGETVTESFQLWTDSGEICPEGTVPIRRTTEQDFLRASSIRRFGRKVRRDSTGTGHEHAVVFVNGDQYYGAKANINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNNRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAFLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2096 473 Pfam Neprosin 256 466 IPR004314 -
Pvu3g2096 473 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 48 473 - -
Pvu3g2096 473 MobiDBLite consensus disorder prediction 156 171 - -
Pvu3g2096 473 Pfam Neprosin activation peptide 128 230 IPR025521 -
Pvu3g2096 473 MobiDBLite consensus disorder prediction 149 171 - -
Pvu3g2096 473 Gene3D - 250 358 - -
Pvu3g2096 473 PANTHER CARBOXYL-TERMINAL PEPTIDASE 48 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2096 Pvu-Chr3 41678162 41681991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2096 - - gmx:100782442 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2096 3 41678162 41681991 Pvu9g1817 9 25658278 25664112 ECH
Pvu3g2096 3 41678162 41681991 Pvu3g2096 3 41678162 41681991 ECH
Pvu3g2096 3 41678162 41681991 Pvu9g1817 9 25658278 25664112 PCT