Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1810 ATGCCTAAGCTTACTTCCTTCTCTTCTCGACACTTCTTGGTCTTATCCCTCGCCTTGAACGTTAGTCTTATACTCAGATTAGTGGTCTACGAAGGAGAAGAACCCCACAACAATTCTTGTTTCGGTTCACAAAGAGCCTCATCGCTTGCACGAACCAATTCCAACATGCTTATATCATCATCATCATCCAATTCAACTTGCACAGCAGGAGGTGGGAATAGAGTGATCAACTTGGACCATGGAGACCCGAGAGTGTATGAGAGATTTTGGAGACAAACGGGTGAGAAGAGCACGATCATAATCCCGGGGTGGCAGTCAATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCGAGGGAAGTGGTGAGGCTGCACACAGTAGTGGGAAATGCTGTCACAGAAGGGCGACACATTGTGGTTGGGACAGGTTCTTCTCAGCTCTTTCTGGCTGCTCTCTATGCTCTCTCCCCTACTGATGCACCCGAACCAATCAGTGTTGTCTGTGCCTCACCCTACTACTCATCGTATCCATCAATGACGAATCACCTGAAATCAGGACTCTACCAATGGGGTGGTGATGCAGAAAGTTTTGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACATGCAAGAATATCTAAGGTCAATAGAAGTCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGGACCTGCAGATCATGATCTTACCCTTTTCACTGTTTCAAAAAGCACTGGCCATGCTGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAAAATGACAAAATTCATAGAGCTGAACACAATTGGAGTGTCTAAGGATTCTCAACTCAGGGCTGCTAAGGTTTTAAGGGCAGTTTCTGACAGCTGGGAACAAGGAAACTCCCAAGAGGGGGAGTCCTTCTTCAAGTTCAGCCACAAACTCATGGCCAATAGGTGGAAGCAACTGAGACTAGTGGTGGAGCATAGCGAGTTGTTCAGTTTGCCCAAATTTTCTCCAGCATTCTGCACTTTTTTCAAAGAGGTTTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAGCACACAACATCTTAACTAGAAGTGGAAAACATTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGATGAAAATTTTAGCCACTTTCTAGATAGACTTTCTGCCATTAAATCGTGA 1311 0.4516 MPKLTSFSSRHFLVLSLALNVSLILRLVVYEGEEPHNNSCFGSQRASSLARTNSNMLISSSSSNSTCTAGGGNRVINLDHGDPRVYERFWRQTGEKSTIIIPGWQSMSYFSDVTNICWFLEAEFAREVVRLHTVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDAPEPISVVCASPYYSSYPSMTNHLKSGLYQWGGDAESFEKEGPYIELVTSPNNPDGHARISKVNRSQGFLVHDLAYYWPQYTPISGPADHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSQEGESFFKFSHKLMANRWKQLRLVVEHSELFSLPKFSPAFCTFFKEVLEPQPAFVWLKCEGNVEDCESFLRAHNILTRSGKHFGVSPKYVRISMLDTDENFSHFLDRLSAIKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1810 436 Pfam Allinase 76 434 IPR006948 GO:0016846
Pvu9g1810 436 Gene3D Aspartate Aminotransferase, domain 1 320 436 IPR015422 GO:0003824
Pvu9g1810 436 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 7 435 - -
Pvu9g1810 436 SUPERFAMILY PLP-dependent transferases 75 433 IPR015424 -
Pvu9g1810 436 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 7 435 - -
Pvu9g1810 436 Gene3D - 31 116 IPR037029 GO:0016846
Pvu9g1810 436 CDD AAT_like 123 431 - -
Pvu9g1810 436 Gene3D - 120 319 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1810 Pvu-Chr9 25554952 25561733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1810 K16903 - gmx:100820582 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1810 9 25554952 25561733 Pvu9g1810 9 25554952 25561733 ECH
Pvu3g2101 3 41757200 41764434 Pvu9g1810 9 25554952 25561733 PCT