Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2101 ATGGTTGCTGTTCCATCTCTGTTTTCCTTGAGGCACTTGCTGGTGCTGTCTCTTGCCCTGAATGTAAGTCTTATCCTTAGGGCACTTTATCATGAGAGTGGAGAAGGCAACAAGTGGTGGTTTTGCTTCAAGAAGAAAATGATGGCAGATGCAGAATCATGGTTGGCTATATCTTCTACCCCGTCTCTCCATAATTCTACTCGTGAAAAAGTCATCAACTTGGACCATGGTGACCCAACAATGTATGAAAGATTTTGGCGACAAATGGGTGACAAGACCACAATCACAATTCCAGGATGGCAATCCATGAGTTATTTATCTGATGTCTCAAAAATTTGCTGGTTTTTGGAGCCTGAGTTTGCAACGGAAGTAGTGAGGTTGCACAGAGTGGTGGGCAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTGGCGGCCCTTTATGCTCTGTCCTCGCCTCATGCTGCTGAACCAATCAGCGTTGTATCTGCCGCGCCCTATTATTCGTCCTACCCATCAATGGCAGATTACCAGAAATCAGGGCTTTACCAATGGGCTGGTGATGCAGAGAATTTTGACAAAGAAGGTCCTTACATTGAGCTGGTTACTTCTCCCAACAACCCTGATGGATATAGAAGGAAATCAATGGTCAACCGAAGCCAGGGACTATTGATTCATGACCTTGCCTATTATTGGCCGCAATACACTCCAATATCCTCGCCATCAGATCATGATCTCACGCTTTTCACTGCCTCAAAATCCACTGGTCATGCAGGAATGCGAATTGGGTGGGCTCTTGTGAAAGATAAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTAAATACAATTGGTGTCTCGAAGGATTCTCAACTCAGAGCAGCCAAGGTTTTAAAGGCAGTGTCTGAGAGCTGCGAACAAGAAAACCACCAAAACGGGGAATCTTTTTTCAAGTACAGCTACAACCTCATGGCACAAAGGTGGAAGCAACTGAGGGAAGTAGTTGATGCCGGTGATATGTTCACATTGCCCCAATTTTCTCCCGCATTCTGCACCTTCTTTGGAAAGGAGACGGAGCCTCAACCAGCTTTCATGTGGTTGAAGTGCGTAGATGTTGAGGATTGCGAGACCTTCCTTCGGGGACACAAAATTTTAACCAGAAGTGGGAGACAGTTTGGGGCTAGCCCAAAATATATATGA 1227 0.4531 MVAVPSLFSLRHLLVLSLALNVSLILRALYHESGEGNKWWFCFKKKMMADAESWLAISSTPSLHNSTREKVINLDHGDPTMYERFWRQMGDKTTITIPGWQSMSYLSDVSKICWFLEPEFATEVVRLHRVVGNAVTEGRHIVVGTGSSQLILAALYALSSPHAAEPISVVSAAPYYSSYPSMADYQKSGLYQWAGDAENFDKEGPYIELVTSPNNPDGYRRKSMVNRSQGLLIHDLAYYWPQYTPISSPSDHDLTLFTASKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSESCEQENHQNGESFFKYSYNLMAQRWKQLREVVDAGDMFTLPQFSPAFCTFFGKETEPQPAFMWLKCVDVEDCETFLRGHKILTRSGRQFGASPKYI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2101 408 CDD AAT_like 118 406 - -
Pvu3g2101 408 Gene3D - 117 320 IPR015421 GO:0003824
Pvu3g2101 408 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 408 - -
Pvu3g2101 408 SUPERFAMILY PLP-dependent transferases 45 408 IPR015424 -
Pvu3g2101 408 Gene3D - 52 112 IPR037029 GO:0016846
Pvu3g2101 408 Pfam Allinase 72 407 IPR006948 GO:0016846
Pvu3g2101 408 Gene3D Aspartate Aminotransferase, domain 1 323 408 IPR015422 GO:0003824
Pvu3g2101 408 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 2 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2101 Pvu-Chr3 41757200 41764434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2101 K16903 - gmx:100777098 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2101 3 41757200 41764434 Pvu3g2101 3 41757200 41764434 ECH
Pvu3g2101 3 41757200 41764434 Pvu9g1810 9 25554952 25561733 PCT