Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1722 ATGGTGACAATGGAAGAGAGTCCACGGAGTCCAGAGGCGAAGGTGGGGTTGAGAGTGGAGGATCTATGGGACGTTCAGGAGCCTCAGCTGAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAGAGCATCCCTGTCTCTGCCTTCCCTCTACCTCCTTCAAATCAAGAAATTGAGATAAAATCAGATACCACTCTAGCAGAAGCAGTGAAAATGCTTGCACAACACAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCTGAAGATGCTAGTTGGATCGACAGATATATAGGAATAGTCGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGATCTGCTATTGCGGCTGCTGTGGATGGAATAACTTCTGCTTTTGAACATGAAGCCTTAGGCCTTGAATCTGCCATGACAACTTCAGGAAATTTTTTTGAGGATCTGACTTCTTCTCAACTTTATAAGAATACAAAGGTTCGTGACATTTCAGGGTCATTCCGCTGGGCCCCCTTTCTCGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTGTTCCTGTTGTAGACTTAGGTGCTGGTCGAATTCAAAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAGCTATCTCAAGTTGGTCTTCCCATCGTGGCACCAAATCATATTATAAAGGTTTATGAAGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGGGGGTTGCCTGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCAGAAATCTACCATGACTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTTAGAAGCTACTTAGAGAAGCATGAAGGGACCTTTACAATGTCAAGTGAACTGATTACATGCAATAAGGATTGCACAATCAAAGAACTGATTCAACTGCTTGACCATGAGAAGATTCATAGGGTCTACGTTGTTGACAATGATGGGAATCTGGAAGGACTGATCACGCTGAGAGATATCATCTCAAGGCTAGTGCATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTCCCGATGCCTCCAAACAGCAGGGTTTGA 1248 0.4439 MVTMEESPRSPEAKVGLRVEDLWDVQEPQLSPDEKLNACFESIPVSAFPLPPSNQEIEIKSDTTLAEAVKMLAQHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGSAIAAAVDGITSAFEHEALGLESAMTTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIQNIITQSSVIHMLAECAGLQWFESWGTKKLSQVGLPIVAPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVRSYLEKHEGTFTMSSELITCNKDCTIKELIQLLDHEKIHRVYVVDNDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1722 415 CDD CBS_pair_SF 59 227 - -
Pvu9g1722 415 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Pvu9g1722 415 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 415 - -
Pvu9g1722 415 SUPERFAMILY CBS-domain pair 254 401 IPR046342 -
Pvu9g1722 415 Gene3D - 244 394 IPR046342 -
Pvu9g1722 415 PANTHER BNAA06G16460D PROTEIN 7 415 - -
Pvu9g1722 415 Pfam CBS domain 57 102 IPR000644 -
Pvu9g1722 415 Pfam CBS domain 341 392 IPR000644 -
Pvu9g1722 415 Pfam CBS domain 260 303 IPR000644 -
Pvu9g1722 415 SUPERFAMILY CBS-domain pair 30 231 IPR046342 -
Pvu9g1722 415 ProSiteProfiles CBS domain profile. 341 399 IPR000644 -
Pvu9g1722 415 Gene3D - 46 237 IPR046342 -
Pvu9g1722 415 ProSiteProfiles CBS domain profile. 255 316 IPR000644 -
Pvu9g1722 415 CDD CBS_pair_SF 196 303 - -
Pvu9g1722 415 SMART cbs_1 55 111 IPR000644 -
Pvu9g1722 415 SMART cbs_1 259 308 IPR000644 -
Pvu9g1722 415 SMART cbs_1 344 392 IPR000644 -
Pvu9g1722 415 SMART cbs_1 182 231 IPR000644 -
Pvu9g1722 415 CDD CBS_pair_SF 259 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1722 Pvu-Chr9 24348693 24352355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1722 - - gmx:100780629 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1722 9 24348693 24352355 Pvu9g1722 9 24348693 24352355 ECH
Pvu3g2172 3 42563269 42566818 Pvu9g1722 9 24348693 24352355 PCT