Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1707 CAAACCGGTGCCTCTCGAAGGAGTATTTCTTCGACGAGGAAAGCCTCCGAATCAGGAGTGTCTCACGTTACTTCTCGAAAATCAATGACCTCTTTCCCACCTGTGGCATTAGCAGGAGAGCGGACAGTGAAATCATTGCGACTTACAAAGGCCCTGACAGTACCTGAAACAACAACCATCTATGAAGCATGTCGTCGAATGGCCGCCCGTAGAGTCGATGCTTTATTACTAACTGATTCTAATGCTTTACTCTGTGGAATCCTCACGGACAAGGATATAGCAACAAGAGTTATTGCCAAAGAGATTAACATTGAAAACACACCAGTTTCCAAAGTCATGACTAGGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCTGCGGAAGCCCTTCAAAAGATGGTGCACGGGAGATTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTTTTGGCTTTACTAGACATAGCAAAGTGTTTGCATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCCGTTGAAGGCGTTGAAAAACATTGGGGAACATCAGAGTCCAATACATCATTCATTGAAACTCTTCGGGAGCAAATATTCAAGCCATCATTATCTACAATCATTTCTGAGAATTCAAAGCTTGTAACAGTATCTCCAACAGACTCGGTTCTGACAACAACAAAAAAGATGGTTGAATTTCATGAGAGTTGTGCTGTTGTGACAGTTAATGACAAACCTCGTGGCATCTTTACTTCGAAAGATATCTTGTTGCGGGTAATTGCACAAAATCTTTCTCCTGAATCAACTCCCATTGAGAAGGTCATGACTCCAAATCCAGAGTGTGTAGTAATTGATACGCCCATTGTTGATGCACTTCACACTATGCATGACGGAAAATTTTTGCATCTTCCTGTGATTGATAGAGATGGCAGTGTAGTTGCTGTGGTCGATGTGATCCATGTTACTCATGCTGCTGTGGCGACAGTAAGTCAGGTTGGGAATAATGAAGCTGCAACCACCTTGATGCAAAGATTTTGGGATTCAGCCATGGCCTTAACTCCAAATGATGATGATGACGATACACGAAGTGACAGTTCCTTGAAATTGGCTTCTGATGGAGGAGACACGGGGAGGTCCATTCCTTATCTTTCATCAAGCATGGCTAATACATTTTCCTTCAAAATACAAGATAAAAAGGGCAGAATGCACAGATTCACATGTGATACCCGGAGCATAAAGGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGATCCTAAGAATATACCTCAAATTTTGTATGAAGATGAAGATCACGATAAAGTTGTATTGGCTTCAGACAGTGATCTTGCAGTTGCTGTGGATCACGCAAAGACAGCTGGTTTGAAGGGGTTGAAATTGCATTTAGACTACGCAGGACCACCGGGTAATGTGAAAACTTCTCGTTCAGGAAGTTATGCTTACTCAGATGCATGGGCCTCTGCATATAGTGCTGCTGCAGCTGGAGCTGCACTTGTTGCTGGCTTAGGCATATTAACGTACTTGAAGCGAGTTTGA 1581 0.4295 QTGASRRSISSTRKASESGVSHVTSRKSMTSFPPVALAGERTVKSLRLTKALTVPETTTIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAKEINIENTPVSKVMTRNPVFVLSETLAAEALQKMVHGRFRHLPVVENGEVLALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKHWGTSESNTSFIETLREQIFKPSLSTIISENSKLVTVSPTDSVLTTTKKMVEFHESCAVVTVNDKPRGIFTSKDILLRVIAQNLSPESTPIEKVMTPNPECVVIDTPIVDALHTMHDGKFLHLPVIDRDGSVVAVVDVIHVTHAAVATVSQVGNNEAATTLMQRFWDSAMALTPNDDDDDTRSDSSLKLASDGGDTGRSIPYLSSSMANTFSFKIQDKKGRMHRFTCDTRSIKEVITSILQRLGDDIDPKNIPQILYEDEDHDKVVLASDSDLAVAVDHAKTAGLKGLKLHLDYAGPPGNVKTSRSGSYAYSDAWASAYSAAAAGAALVAGLGILTYLKRV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1707 526 SUPERFAMILY CBS-domain pair 218 330 IPR046342 -
Pvu9g1707 526 ProSiteProfiles CBS domain profile. 213 272 IPR000644 -
Pvu9g1707 526 Pfam CBS domain 48 95 IPR000644 -
Pvu9g1707 526 Pfam CBS domain 109 153 IPR000644 -
Pvu9g1707 526 Pfam CBS domain 216 262 IPR000644 -
Pvu9g1707 526 Pfam CBS domain 277 326 IPR000644 -
Pvu9g1707 526 SMART cbs_1 116 160 IPR000644 -
Pvu9g1707 526 SMART cbs_1 50 98 IPR000644 -
Pvu9g1707 526 SMART cbs_1 218 265 IPR000644 -
Pvu9g1707 526 SMART cbs_1 283 331 IPR000644 -
Pvu9g1707 526 ProSiteProfiles CBS domain profile. 47 104 IPR000644 -
Pvu9g1707 526 Pfam PB1 domain 395 478 IPR000270 GO:0005515
Pvu9g1707 526 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 18 514 - -
Pvu9g1707 526 MobiDBLite consensus disorder prediction 358 378 - -
Pvu9g1707 526 Gene3D - 394 477 - -
Pvu9g1707 526 ProSiteProfiles CBS domain profile. 280 341 IPR000644 -
Pvu9g1707 526 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 18 514 - -
Pvu9g1707 526 ProSiteProfiles CBS domain profile. 113 171 IPR000644 -
Pvu9g1707 526 SUPERFAMILY CBS-domain pair 40 157 IPR046342 -
Pvu9g1707 526 CDD CBS_pair_MUG70_1 48 164 - -
Pvu9g1707 526 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g1707 526 Gene3D - 19 178 IPR046342 -
Pvu9g1707 526 Gene3D - 188 342 IPR046342 -
Pvu9g1707 526 SUPERFAMILY CAD & PB1 domains 387 477 - -
Pvu9g1707 526 SMART PB1_new 395 480 IPR000270 GO:0005515
Pvu9g1707 526 CDD PB1_MUG70 396 480 - -
Pvu9g1707 526 ProSiteProfiles PB1 domain profile. 393 480 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1707 Pvu-Chr9 24160133 24165319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1707 - - gmx:100785816 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1707 9 24160133 24165319 Pvu9g1707 9 24160133 24165319 ECH
Pvu9g1707 9 24160133 24165319 Pvu2g2948 2 45016388 45023149 PCT