Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1702 ATGGGGGAGGAGGAAAAGAAACCAGAGGAACCCAAGGCCAAGGAGAAAAAACCAGAGGAACCCGAAAAGAAACAAGAGGAGAAGAAGGAAGAAACTGCGGCAAAACCAGCGGGAGAGAAAAAACCAGAAGAGGAGAAGAAAGAAGTGACTCCTCCACCGCCACCGCCTCCGCAGGAGATTGTGCTCAAAGTGTTCATGCATTGCGAGGGTTGCGCTCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGTGTCGAAGATGTACTCACCGATTGCAAATCTCACAAGGTGGTTGTCAAGGGAGAGAAAGCGGATCCTCTGAAGGTTTTGGAGAGAATACAGAGGAAGAATCACAGACTGGTCGAGCTTCTCTCTCCGATCCCGAAACCTCCAGAGGAGCAGAAGGTCCCGGAAGAAGAAAAGCCCAAGCTCGAAGAGAAAGTTGAAGAGACTCCGATTGTGACGGTTCTGAAAGTTCACATGCATTGCGAAGCTTGTTCACTGGAAATCAAGAGACGCATACAGAGAATGAAGGGAGTGGAATCAGCTGAACCCGATCTGAAGAACTCAGTAGTGAGTGTGAAGGGCGTGTATGATCCAGAGAAGTTGGTTGAGTACGTGAAAAAGAGAACTGGGAAGCACGCAGCGATCGTGAAGCAAGAGCCAGAAAAGGAAGAGAAGGTGGAGGAAACAAAGGAGGCGAAGAAGGAGGAGGTTGAGAAAGAGAAGAAGAGTGGTGAAGGAGAAGAAAACAAGGAAAAGAAAGAGGAAGAAGCAAAGGGTGAGACCAAAGCAGAGGAAACAGCAGCATCTAGTGAAGACAGCAACAAGGTTGTTCCAGAGGTGAAGATTAATGAATCCTTCTATAACTCACCAAGGTATGGCATGGAGGTGTATGCATATCCTGCACACCCTGTACACCCTGTACACCCTGCATACCCTGGGTATTACCATGCCTACCCTCCCCAGATGTTCAGCGATGAGAACCCAAATGCTTGCATTGTCATGTAA 1011 0.4876 MGEEEKKPEEPKAKEKKPEEPEKKQEEKKEETAAKPAGEKKPEEEKKEVTPPPPPPPQEIVLKVFMHCEGCARKVRRSLKGFPGVEDVLTDCKSHKVVVKGEKADPLKVLERIQRKNHRLVELLSPIPKPPEEQKVPEEEKPKLEEKVEETPIVTVLKVHMHCEACSLEIKRRIQRMKGVESAEPDLKNSVVSVKGVYDPEKLVEYVKKRTGKHAAIVKQEPEKEEKVEETKEAKKEEVEKEKKSGEGEENKEKKEEEAKGETKAEETAASSEDSNKVVPEVKINESFYNSPRYGMEVYAYPAHPVHPVHPAYPGYYHAYPPQMFSDENPNACIVM* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1702 336 MobiDBLite consensus disorder prediction 218 279 - -
Pvu9g1702 336 Pfam Heavy-metal-associated domain 62 116 IPR006121 GO:0046872
Pvu9g1702 336 Pfam Heavy-metal-associated domain 157 214 IPR006121 GO:0046872
Pvu9g1702 336 Gene3D - 56 129 - -
Pvu9g1702 336 MobiDBLite consensus disorder prediction 218 271 - -
Pvu9g1702 336 SUPERFAMILY HMA, heavy metal-associated domain 154 213 IPR036163 GO:0046872
Pvu9g1702 336 MobiDBLite consensus disorder prediction 1 50 - -
Pvu9g1702 336 CDD HMA 156 216 IPR006121 GO:0046872
Pvu9g1702 336 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 336 - -
Pvu9g1702 336 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 336 IPR044577 GO:0046872
Pvu9g1702 336 ProSiteProfiles Heavy-metal-associated domain profile. 161 209 IPR006121 GO:0046872
Pvu9g1702 336 ProSiteProfiles Heavy-metal-associated domain profile. 66 122 IPR006121 GO:0046872
Pvu9g1702 336 Gene3D - 149 217 - -
Pvu9g1702 336 MobiDBLite consensus disorder prediction 1 58 - -
Pvu9g1702 336 CDD HMA 66 116 IPR006121 GO:0046872
Pvu9g1702 336 SUPERFAMILY HMA, heavy metal-associated domain 58 118 IPR036163 GO:0046872
Pvu9g1702 336 Coils Coil 224 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1702 Pvu-Chr9 24044937 24046958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1702 - - gmx:100787932 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1702 9 24044937 24046958 Pvu9g1702 9 24044937 24046958 ECH
Pvu2g2940 2 44944635 44946573 Pvu9g1702 9 24044937 24046958 PCT