LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g2940	ATGGGCGAGGAAGAGAAAAAACCAGAAGAAAGCAAAGGGGAGGAGAAAAAAGCAGAGGAACCCAAGGAAGACAAGAAACCGGAGCAAGACCAAAAAGCAGAGGAGTCAAAAGATGAAAAGGAATCCAAGGAGGAAGAATCTGCGCCGCCGCCGGAAATCATGCTTAGAGTCTTCATGCATTGCGAGGGTTGTGCCCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGGGTGGAAGATATTCTCACGGATTGCAAGTCTCACAAGGTGGTGGTGAAAGGCGAAAAGGCGGATCCGCTGAAGGTTCTAGAAAGAGTACAGAGGAAGAGCCATAGAAAGGTTGAACTTCTCTCTCCAATCCCAAAACCACCGGCCGAAGAAGAGAAAAAGGCCGAGGAAGAGAAACCAAAAGCAGAGGAGAAGAAAGAAGAGCCTCAGGTTATTACAGTTGTTTTGAGAGTACACATGCATTGCGAAGCTTGCGCCCAAGAAATCAAGAGACGCATAGAGAAAATGAAAGGAGTGGAATCAGTGGAAGCAGATCTGAAGAGTTCAGAGGTGAGCGTGAAGGGGGTGTTCGAGGCAGAGAAGTTGGTGGAGCACGTGTCGAAGAGGACAGGGAAGCATGCAGTGATAGTGAAGCAGGAAGCAGAGAAGAAGGAGGAGGAGGCAAAAGAAGAGAGCAAAGGGGAGGAGGGGGAGAAGAAGGAGAAAGAGGGTGGTGAAGGAGAGGAAAAGAAGGAGAAGAAAGAAGGAGAAGGAGAGGGTGAAGGGAAAGCAGAAGAGGGAGGCACAGAAGAAAGCACAGTGGTGGAGCTGAGAAAGAGTGAGTATTATTACAACCCTCCAAGGTATGGAATGGAGTTCTATGCATACCCTGGACCAGCTTACCCTCCACAGATCTTCAGTGATGAGAACCCCAATGCCTGTAGTGTGATGTAA	942	0.4915	MGEEEKKPEESKGEEKKAEEPKEDKKPEQDQKAEESKDEKESKEEESAPPPEIMLRVFMHCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERVQRKSHRKVELLSPIPKPPAEEEKKAEEEKPKAEEKKEEPQVITVVLRVHMHCEACAQEIKRRIEKMKGVESVEADLKSSEVSVKGVFEAEKLVEHVSKRTGKHAVIVKQEAEKKEEEAKEESKGEEGEKKEKEGGEGEEKKEKKEGEGEGEGKAEEGGTEESTVVELRKSEYYYNPPRYGMEFYAYPGPAYPPQIFSDENPNACSVM*	314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g2940	313	Pfam	Heavy-metal-associated domain	55	109	IPR006121	GO:0046872
	Pvu2g2940	313	Pfam	Heavy-metal-associated domain	151	209	IPR006121	GO:0046872
	Pvu2g2940	313	Coils	Coil	214	234	-	-
	Pvu2g2940	313	MobiDBLite	consensus disorder prediction	112	143	-	-
	Pvu2g2940	313	ProSiteProfiles	Heavy-metal-associated domain profile.	156	204	IPR006121	GO:0046872
	Pvu2g2940	313	SUPERFAMILY	HMA, heavy metal-associated domain	55	109	IPR036163	GO:0046872
	Pvu2g2940	313	MobiDBLite	consensus disorder prediction	213	273	-	-
	Pvu2g2940	313	CDD	HMA	59	115	IPR006121	GO:0046872
	Pvu2g2940	313	Gene3D	-	144	213	-	-
	Pvu2g2940	313	CDD	HMA	151	210	IPR006121	GO:0046872
	Pvu2g2940	313	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	313	IPR044577	GO:0046872
	Pvu2g2940	313	MobiDBLite	consensus disorder prediction	1	50	-	-
	Pvu2g2940	313	Gene3D	-	50	122	-	-
	Pvu2g2940	313	SUPERFAMILY	HMA, heavy metal-associated domain	145	215	IPR036163	GO:0046872
	Pvu2g2940	313	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	313	-	-
	Pvu2g2940	313	Coils	Coil	26	46	-	-
	Pvu2g2940	313	MobiDBLite	consensus disorder prediction	1	54	-	-
	Pvu2g2940	313	ProSiteProfiles	Heavy-metal-associated domain profile.	59	115	IPR006121	GO:0046872

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g2940	Pvu-Chr2	44944635	44946573	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g2940	-		-	gmx:100796289	336.65

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g2940	2	44944635	44946573	Pvu2g2940	2	44944635	44946573	ECH
	Pvu2g2940	2	44944635	44946573	Pvu9g1702	9	24044937	24046958	PCT