Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1665 ATGGAATCAAACGGCGAGAACGGAGGCAGCACGAGCAGAGAGGAACAGGAAGAGGCATTGGTCGCTTTGATCGAACACCGAACTCACGAAGTCAAAAACCTTCGTCACCGCATCGCTTATTACAAAACCCAGCTTGATGAAGCGGAGAAAAGGTTGCAAGACTCTGTATCCAAATTGTCTCGCCTTCGAGGTCAGACTAATGCATTGTCATCCCGAAATACCTTAGATGATGGAATTAAAACTGTGAAGACAGAGCGCAGATCAAACAGTCCCATTGATAGAAATGAAGGTTCTATAAAAAATCGACATCAATCTAAACCAGAACTTCTTATCCCTTCAGTTAATCCAAAAGTTTCACAACCTGTATTGTTGCCAAAGCCTTCTTCAAAAGCTTCAGTAAGTTCCAGTTCTGAAGCAACTCCTGGAATCCATAATTCTCCAATCACAGGTGATAGCTCTAGGGGAAAATCTGACAAGTCCCATAATCATAGACTTTCTTCTGAGCAGCAAAAAACTGAAATCAAGGACAAAGGGACAAAAAGGAAATTTGAACAAAAAGAACACAAGGAATTGATTCCTTTAATACGCAAGAGTTCTTCACCAATCTTAGTACAGTGTCAAACAAGCAACCACATCTCAAGTCAACACAAGAGGAAATTGCGGAGTATTGCTTTGTGCCCTGTGAATGATCAGCTTTTCGTGACCAGTGCTCTGGATGGACTGGTCAACTTCTGGCAAATTCAGGCTAAGGGAGCAGGAGCCTCTCGTCTTAGCACCACTGATTGTTCATCCCAAAAGCATAGGAGATGGCCAGAAGATTTAGTTTGGCACCCAGAAGGAAACAGCCTATTTGCAGTATATAGTGCTGATGGTGGTGACTCTCAAGTATCAATTACAAATCTGAATAAAGGACAACAAGGGGGAGAACGTGTAAAGTTCTTAGAGGACAAGCCTCATGTAAAGGGAATTATCAATGGCATTGTTTTTATGCCATGGGAGAACACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGAGTGAGCAGGAGGGTGAGAAGTGGAAACCAAAGGCATTGCATAGAAATCTTCACTCATCTGCTGTCATGGGAGTTGCTGGTATGCAGCACAAGCAGATGGTGTTATCTGTTGGTGCAGATAGGAGATTATTTGGGTATGATGTTCGTGCAGGAAGAGCAGATTTCAAGCATCAGGTTGATAGCAAATGCATGAGTGTCCTGCCCAATCCATGCGACTTCAATTTATTCATGGTTCAAACAGGGACCCATGAGAGGCAGCTTCGGTTGTTTGATATTAGATTGAGGAATACAGAACTTCATGCTTTTGGATGGAAGCAAGAAAGCAGTGATTCTCAATCAGCTCTGATAAATCAGTCTTGGTCTCCTGATGGACTATATATAACATCTGGTTCTGCAGATCCTGTGATTCACATATTTGATATAAGGTATACTGCTCACAAGCCTTCCCAAACTATAAGAGCACATCAGAAACGAGTCTTCAGAGCCATGTGGCTTCAGTCCATTCCTCTTGTCGTTTCCATATCATCCGATCTTAACATTGGACTGCACAAGGTTTACACATGA 1611 0.4252 MESNGENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSVSKLSRLRGQTNALSSRNTLDDGIKTVKTERRSNSPIDRNEGSIKNRHQSKPELLIPSVNPKVSQPVLLPKPSSKASVSSSSEATPGIHNSPITGDSSRGKSDKSHNHRLSSEQQKTEIKDKGTKRKFEQKEHKELIPLIRKSSSPILVQCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGLVNFWQIQAKGAGASRLSTTDCSSQKHRRWPEDLVWHPEGNSLFAVYSADGGDSQVSITNLNKGQQGGERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVVLWSEQEGEKWKPKALHRNLHSSAVMGVAGMQHKQMVLSVGADRRLFGYDVRAGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQSWSPDGLYITSGSADPVIHIFDIRYTAHKPSQTIRAHQKRVFRAMWLQSIPLVVSISSDLNIGLHKVYT* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1665 536 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 6 534 - -
Pvu9g1665 536 Pfam WD domain, G-beta repeat 466 489 IPR001680 GO:0005515
Pvu9g1665 536 Coils Coil 31 65 - -
Pvu9g1665 536 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 6 534 - -
Pvu9g1665 536 MobiDBLite consensus disorder prediction 63 185 - -
Pvu9g1665 536 MobiDBLite consensus disorder prediction 78 103 - -
Pvu9g1665 536 SUPERFAMILY WD40 repeat-like 218 533 IPR036322 GO:0005515
Pvu9g1665 536 Gene3D - 127 415 IPR015943 GO:0005515
Pvu9g1665 536 SMART WD40_4 356 396 IPR001680 GO:0005515
Pvu9g1665 536 SMART WD40_4 307 350 IPR001680 GO:0005515
Pvu9g1665 536 SMART WD40_4 207 246 IPR001680 GO:0005515
Pvu9g1665 536 SMART WD40_4 494 533 IPR001680 GO:0005515
Pvu9g1665 536 SMART WD40_4 452 489 IPR001680 GO:0005515
Pvu9g1665 536 SMART WD40_4 258 300 IPR001680 GO:0005515
Pvu9g1665 536 MobiDBLite consensus disorder prediction 154 185 - -
Pvu9g1665 536 MobiDBLite consensus disorder prediction 63 77 - -
Pvu9g1665 536 MobiDBLite consensus disorder prediction 125 153 - -
Pvu9g1665 536 Gene3D - 416 536 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1665 Pvu-Chr9 23381846 23387260 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1665 - - gmx:100799587 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1665 9 23381846 23387260 Pvu9g1665 9 23381846 23387260 ECH
Pvu2g2894 2 44514714 44517886 Pvu9g1665 9 23381846 23387260 PCT