Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1660 ATGGAGGGTGTTGTGAGCCCTGAAGAACCATCACAGAGGTCACCGTTGGATTCCAGTTCCAAACAAGACACAACCAATGAAGTATTGAAAGACAGCACTGATGCCGAAATCACCAAGATTCGTCTCATGAGGGCCTTTGTTGAAGCCCGAGATCCCTCTTCCAAGGAAGTGGATGATTTGATGATTAGAAGATTCTTGCGGGCTCGTAATTTAGATGTGGAGAAGGGTTCGGCGATGTTCCTGAAGTACTTGAATTGGAAACGTTCGATGATTCCAAATGGTTATATATCACCATCAGAGATTGCCGAAGATATTGCACAGGAGAAGCTGTTTGTGCAAGGGCTCGACAAGAAGGGTCGACCTATAATTGTTGCCTTTGCAGCAAAACATTTTCAAAACAAAAATGGTGCCGATGGATTTAAACGTTATGTAGCCTTTGCTCTTGAGAAGCTATGTTCAAGGATGCCACCGGGCCAAGAAAAGTTTCTTAGCATTGCAGACATTGAAGGATGGGGATATGCAAACACTGACCTTCGTGGATACCTTAATGCTCTATCCATTTTGCAGGATTGCTACCCTGAAAGATTGGGAAAGATGTTTATTGTACACGCACCTTATTTGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGACAACACCAAGAAAAAGATAGTATTTGTGGAGAACAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGAAGAGAGTCAACTCCCAGATATATACGGAGGCCAAATGCCGTTAGTGCCTATCCAGGATAGCTGA 795 0.4214 MEGVVSPEEPSQRSPLDSSSKQDTTNEVLKDSTDAEITKIRLMRAFVEARDPSSKEVDDLMIRRFLRARNLDVEKGSAMFLKYLNWKRSMIPNGYISPSEIAEDIAQEKLFVQGLDKKGRPIIVAFAAKHFQNKNGADGFKRYVAFALEKLCSRMPPGQEKFLSIADIEGWGYANTDLRGYLNALSILQDCYPERLGKMFIVHAPYLFMKIWKMIYPFIDDNTKKKIVFVENKKLKSTLLEEIEESQLPDIYGGQMPLVPIQDS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1660 264 Gene3D - 4 263 IPR036865 -
Pvu9g1660 264 MobiDBLite consensus disorder prediction 1 30 - -
Pvu9g1660 264 SUPERFAMILY CRAL/TRIO N-terminal domain 28 94 IPR036273 -
Pvu9g1660 264 PANTHER OS03G0850700 PROTEIN 18 264 - -
Pvu9g1660 264 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 18 264 - -
Pvu9g1660 264 SMART CRAL_TRIO_N_2 58 83 IPR011074 -
Pvu9g1660 264 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 98 260 IPR001251 -
Pvu9g1660 264 MobiDBLite consensus disorder prediction 11 26 - -
Pvu9g1660 264 CDD SEC14 111 255 IPR001251 -
Pvu9g1660 264 SUPERFAMILY CRAL/TRIO domain 100 257 IPR036865 -
Pvu9g1660 264 SMART sec14_4 103 257 IPR001251 -
Pvu9g1660 264 Pfam CRAL/TRIO domain 109 254 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1660 Pvu-Chr9 23267271 23269904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1660 64 249 Acyl Lipid Metabolism Gene Families AT1G55840 26.000 1.72e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1660 - - gmx:100797666 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1660 9 23267271 23269904 Pvu9g1660 9 23267271 23269904 ECH
Pvu2g2890 2 44474845 44480756 Pvu9g1660 9 23267271 23269904 PCT