Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2890 ATGGAAGAAGCAATGAACACGAGGGTTAGAGAAGAAGTGAGAGTAGAAGATGATAGCACAAAAACTGAACTCACCAAAATTTGTCTCCTTAGAACAATTCTTGAAACACAGGATCCCTCTTCTAAGGAAGAAGATGATTTTACGATTAGAAGATTCCTACGTGCTCGTGATTTAGATTTGGATAAGGCTTCTACAATGTTCCTCAAATACTTGAAATGGAAACATTCATTTGTTCCAAATGGTGTATCTGTATCAGATGTTCCCAATGAAGTTGCTCAAGACAAGGCCTTCATACAAGGACACGACAAGATTGGTCGACCTATACTTATTGTCTTCGGTAAAAAACATTTTCAGAACAAACATGGTGGTCTAGATGAATTCAAACGGTTTGTGGTCTTTGTCTTTGACAAAATATGTGCCAGTATGCCACCTGGTCAAGAAAAGTTTGTTGGTATAGCAGAACTTAAGGGATGGGGATACTCAAACAGTGATATTCGTGGATACATAAGTGCACTAGCAATTTTGCAGGATTACTACCCAGAAAGATTGGGGAAGTTGTTTATTGTCAATGCACCATACATATTTATGAAAGTGTGGAAAATTGTTTACCCTTTTATTGACAACAAAACCAAGAAGAAGATAGTGTTTGTGGATAAAAATAAGGTGAAGTCAGCACTGCTAGAAGACATTGATGAAAGTAATATACCAGAGATATTTGGTGGGCCAGTGCCATTAGTCCCAATTCAGGATATCTAA 756 0.3743 MEEAMNTRVREEVRVEDDSTKTELTKICLLRTILETQDPSSKEEDDFTIRRFLRARDLDLDKASTMFLKYLKWKHSFVPNGVSVSDVPNEVAQDKAFIQGHDKIGRPILIVFGKKHFQNKHGGLDEFKRFVVFVFDKICASMPPGQEKFVGIAELKGWGYSNSDIRGYISALAILQDYYPERLGKLFIVNAPYIFMKVWKIVYPFIDNKTKKKIVFVDKNKVKSALLEDIDESNIPEIFGGPVPLVPIQDI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2890 251 Pfam CRAL/TRIO domain 95 241 IPR001251 -
Pvu2g2890 251 SUPERFAMILY CRAL/TRIO domain 86 244 IPR036865 -
Pvu2g2890 251 SMART sec14_4 90 244 IPR001251 -
Pvu2g2890 251 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 9 250 - -
Pvu2g2890 251 CDD SEC14 97 241 IPR001251 -
Pvu2g2890 251 PANTHER OS03G0850700 PROTEIN 9 250 - -
Pvu2g2890 251 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Pvu2g2890 251 SUPERFAMILY CRAL/TRIO N-terminal domain 17 83 IPR036273 -
Pvu2g2890 251 Gene3D - 15 247 IPR036865 -
Pvu2g2890 251 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2890 Pvu-Chr2 44474845 44480756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2890 51 237 Acyl Lipid Metabolism Gene Families AT5G47730 29.064 1.07e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2890 - - gmx:548015 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2890 2 44474845 44480756 Pvu2g2890 2 44474845 44480756 ECH
Pvu2g2890 2 44474845 44480756 Pvu9g1660 9 23267271 23269904 PCT