Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1648 ATGAGTTCGAAAAGAGGGAGTGGGAGACCTAAAACCATGGTTAATAATGATATGTCCAAAGGGAAAAGCGTATCCGAATCTCATCCAAATATTGATCAGTTGACTCAGGGTGTTGCTGACACCAAGCTAAACCCAGGACAAGATGATGGTGAATGGGAGGTATATGGAAAGAAATCCAAGAACAGAGCTGGAAGCAGTGCTGCAAAACCATGGGGAGGACCAGCCCATAATTCTAATCCTAGGGCCTGGGTGAATGCAGATATGGCTCAAAAGCCAGGCATCTGGAATCATGGTGGAGTTGGAAGATCTTCTGGAAATTCAATGCAGACACAAAATGCTAACTTTAGGAGACCAGCTGGCAGAGGAAATGGAAGGCCTCAGTCTGCAACAAGTGGATATGAAGGCAACTATGTGCCTCCAAATCCCTTAATCCGGCCTCCACTTGAGCATGGCTGGAACTGGCAATCTAGACGTGGTGCAATACCGGCCAATGTAAGGGATGAAATTGCACCTGAAGACCTTGAACAGAATAATGATGTTGATGATGATGATGATGGAGAGGATGACTCAGATGCTTTGGAAGATACTGATGATGATCTAATGAGTGATGACTATGATTCTGATGTTAGTCAAAAGAGCCATGAGACACGTAAGAAGAACAAATGGTATAGGAAGTTCTTTGAGAATTTGGATAGCTTGACTGTTGAAGAGTTAAATGAACCGGAAAGACAGTGGCATTGTCCAGCTTGTCAAGGTGGTCCTGGAGCTATTGATTGGTACAGAGGACTGCAGCCCTTGGTGACACATGCTAAAACAAAGGGATCAAAAAGGGTGAAGATTCACAGAGAACTTGCTACACTTTTGGATGAGGAATTACGCAGGAGGGGTACTTCAGTAATTCCAGCTGGGGAGTCATTTGGAAAATGGAAAGGTTTGAAAGAAGAAGAAAAAGATCACGAAATAGTTTGGCCTCCAATGGTTATCATTCAGAATACGAAGCTTGAACTGGACGAAAATGATAAGTGGATAGGTATGGGTAACCAAGAACTTCTTGATTATTTTAGCACATATGCTGCTGTTAAAGCACGCCATTCTTATGGCCCACAAGGTCATCGTGGGATGAGTGTTTTGATATTTGAAGCCTCAGCCAGTGGCTATCTAGAGGCAGAGCGTCTTGACAAGCATTTTGCAGAGCAAGGAACTGATAAAGATTCTTGGTTCAATCGCCCTATTTTATATCTCCCTGGGGGGAATCGCCAGCTCTATGGTTACATGGCTACAAAAGAAGATCTTGACTTTTTCAATAGGCATAGCCAAGGTAAATCTAGACTCAAATTTGACATGAGATCATACCAGGAGATGGTTGTACACCAAATTCGCCAGATGAATGAAGACAACCAACAACTTATATATTTAAAGAACAAGGTTGAGAGAAAAACTAGACACACGATAGCTCTTGAAGAATCCATTGGTAAAATGTCTGAGAAGCTGCGCAAGACAATGGAGGAAAACCGCATTGTGAGGAGGAGAACTAAAATGCAACATGAAGAAACCAAAGAAGAGATGTATATGCAAGAACAATTCTTCAAGGACCAGATCAAGGTCATTCATGATTCAAGGGATGCAAAGGAAGAAGATTTTGAGAGGATGCAACAGGAGGAACGTGAGAAGGTGATGCAGTCAAGTACTACTGCTCATGTAAACGCTGAGGAATATAGACTCAAGGTGGATGAATATCTAAAATTTGTTGAGGTTCAAGATAAAGAAATGGAGAATTTTGTTGCTGAAAAGGAGAAACTGTTGTATGCTCATGAAGTGGGTTATGCTGCTATGAAGAGGAGGCATTGGGAGGAAGAGGTGCAGCATGAGCAGAAGTTTGATGAGGAACTTGCCAAGCTCATGGAAAAGTACTCCCCTTCCTAA 1923 0.4249 MSSKRGSGRPKTMVNNDMSKGKSVSESHPNIDQLTQGVADTKLNPGQDDGEWEVYGKKSKNRAGSSAAKPWGGPAHNSNPRAWVNADMAQKPGIWNHGGVGRSSGNSMQTQNANFRRPAGRGNGRPQSATSGYEGNYVPPNPLIRPPLEHGWNWQSRRGAIPANVRDEIAPEDLEQNNDVDDDDDGEDDSDALEDTDDDLMSDDYDSDVSQKSHETRKKNKWYRKFFENLDSLTVEELNEPERQWHCPACQGGPGAIDWYRGLQPLVTHAKTKGSKRVKIHRELATLLDEELRRRGTSVIPAGESFGKWKGLKEEEKDHEIVWPPMVIIQNTKLELDENDKWIGMGNQELLDYFSTYAAVKARHSYGPQGHRGMSVLIFEASASGYLEAERLDKHFAEQGTDKDSWFNRPILYLPGGNRQLYGYMATKEDLDFFNRHSQGKSRLKFDMRSYQEMVVHQIRQMNEDNQQLIYLKNKVERKTRHTIALEESIGKMSEKLRKTMEENRIVRRRTKMQHEETKEEMYMQEQFFKDQIKVIHDSRDAKEEDFERMQQEEREKVMQSSTTAHVNAEEYRLKVDEYLKFVEVQDKEMENFVAEKEKLLYAHEVGYAAMKRRHWEEEVQHEQKFDEELAKLMEKYSPS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1648 640 Coils Coil 459 479 - -
Pvu9g1648 640 Pfam XS zinc finger domain 247 285 IPR005381 GO:0031047
Pvu9g1648 640 Gene3D XS domain 313 491 IPR038588 -
Pvu9g1648 640 MobiDBLite consensus disorder prediction 100 117 - -
Pvu9g1648 640 Pfam XS domain 318 431 IPR005380 GO:0031047
Pvu9g1648 640 CDD RRM_like_XS 321 431 IPR005380 GO:0031047
Pvu9g1648 640 MobiDBLite consensus disorder prediction 1 42 - -
Pvu9g1648 640 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 640 - -
Pvu9g1648 640 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 640 IPR044287 GO:0031047|GO:0051607
Pvu9g1648 640 MobiDBLite consensus disorder prediction 174 204 - -
Pvu9g1648 640 MobiDBLite consensus disorder prediction 1 145 - -
Pvu9g1648 640 MobiDBLite consensus disorder prediction 167 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1648 Pvu-Chr9 23131828 23139557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1648 - - gmx:100792019 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2873 2 44337834 44341715 Pvu9g1648 9 23131828 23139557 PCT