Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2873 ATGAGTTCAAAAAGAGGTGGGAGATCTTCCACTGTGGCAACCAATGATGATTCTTCTTCCAGAGGGAAAAATGCATCGGAGTATCTTCCAAAAATTGAGCAATTAACTCAAGATGTTGCTGATGTTAACCTTGAGTCAGGACAAGATGATGGTGAATGGGTGGTATATTCAAGGAAATCCAAGAACAGAGTAAAAAATAGTGCTGCAAAACCATGGAGTCCTACGGTTACTTGGAATGATGGAGGAGTTAGAAGGGCTTCTGGTTGGCAGTCCCAAAATACTAACTTCAGGAGACCTGCTGGAGGAAATGCAAGGGCCCAGTTAAATGCAAGTAAATCTGAAAGCAACAATGTGATTTCTAGCCCATTTATTCGACCTCCCTTGGAGCATGGGTGGAATTGGCAATCTAAAACTGGTTCCAAGCAGCCCTGGGGTGGTGATAACATGATAAAGGATGAGATTACAGAAGAATCCCCAGTGAAGAAGGATAGTGTTGATGAACAGGAGGAAGAAGGCTTTGATGCCATGGAAGATACTGATGACGATCTAATGAGTGATGACTATGATTCTGCTAGTGAAAAGAGCCACGAGACTCGAAAGAAGAGCAAATGGTTTAAGGTTTTCTTTGAGAATTTGGATAGCCTTTCAATTGAGAAGATCAATGAAGCAGAAAGGCAGTGGCACTGTCCGGCTTGTCGAGGTGGTCCTGGTGCTATTGATTGGTACAGAGGGCTTCAGCCTCTGATTACTCATGCCAAAACAAAAGGGTCAAAAAGGGTGAAGATCCACAGGGAGTTTGCTGAGCTTTTGGACGAGGAATTGCTCAGAAGAGGCACTGCAGTAATTCCAGCTGGAGAAGTATTTGGTAAGTGGAAAGGTTTGAAAGATGAGGAGAAAGATCATGAAATTGTTTGGCCTCCAATGGTTGTCATTCAGAATACAAGGCTTGAACAGGATGAAAATGACAAGTGGCTGGGTATGGGTAACCAAGAGCTTCTTAATTATTTTAGCACATATGATGCTGTGAAAGCTCGACACTCTTATGGCCCCCAGGGTCATCGAGGGTTGAGTGTTTTGATATTTGAAGCCTCAGCTATAGGTTATCTTGAGGCCGAGCGTCTCCACAAGCACTTTGCAGAACAAGGAACTCACAGAGATGCTTGGTTTAGCCACTACCGCAGATTATTTCTCCCTGGTGGCCGGAGACAGCTCTATGGCTACATGGCAGTAAAAGAAGACCTGGACATTTTCAACAGACACGGCCAAGGTAAATCTAGACTCAAATATGAGATGAGATCATACAAGGAGATGGTTGTAAACCAACTTCGGCAAATGAGTGAGGACAACCAGCTACTTGTTTATTTGAAGGACAGGGATGTCAAAAAACAAAAACAAACAAAAGCTCTTGAAGAATCTTTGGATATAGTGACTCAGAAGCTGCGAAGGACAATGGAGGAAAATCGCATTGTGAGGTTGAGAACTAAAATGCAACACGAAGAGAACAAGGAAGAGATGTACATGCAAGAACAATTTTTCAAGGACCAGATCAGAATCATTCACGATTCAAGGGCTGCAAAGGAAGAAGAGTTTGAGAGGACGCAGCAGGAGAAACGTGAGAAGGTGAAGCCATCAAGTTCCAGCCCTTCAAATGAAGAGGAAGGGAGAGTCAAGGTGGATGAATATCTAAAATTTGTTGAGTTTCAAGATAAAGAAATGGAAAACTTTGTTGGTGAAGAGGAGAAACTCCGAGAAGCTCATAAAGACAATGTTGCTGCAATGACGAGGAGACACTGGGAAGAAAAGGTGGAGTTAGAGGAAAGTTTTAATGAGGGACTATCCAAGCTCATGGCAAAGTACTCCCTGTCTCACCCACAAACTAAGTTCAATGGTATCTGA 1896 0.4309 MSSKRGGRSSTVATNDDSSSRGKNASEYLPKIEQLTQDVADVNLESGQDDGEWVVYSRKSKNRVKNSAAKPWSPTVTWNDGGVRRASGWQSQNTNFRRPAGGNARAQLNASKSESNNVISSPFIRPPLEHGWNWQSKTGSKQPWGGDNMIKDEITEESPVKKDSVDEQEEEGFDAMEDTDDDLMSDDYDSASEKSHETRKKSKWFKVFFENLDSLSIEKINEAERQWHCPACRGGPGAIDWYRGLQPLITHAKTKGSKRVKIHREFAELLDEELLRRGTAVIPAGEVFGKWKGLKDEEKDHEIVWPPMVVIQNTRLEQDENDKWLGMGNQELLNYFSTYDAVKARHSYGPQGHRGLSVLIFEASAIGYLEAERLHKHFAEQGTHRDAWFSHYRRLFLPGGRRQLYGYMAVKEDLDIFNRHGQGKSRLKYEMRSYKEMVVNQLRQMSEDNQLLVYLKDRDVKKQKQTKALEESLDIVTQKLRRTMEENRIVRLRTKMQHEENKEEMYMQEQFFKDQIRIIHDSRAAKEEEFERTQQEKREKVKPSSSSPSNEEEGRVKVDEYLKFVEFQDKEMENFVGEEEKLREAHKDNVAAMTRRHWEEKVELEESFNEGLSKLMAKYSLSHPQTKFNGI* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2873 631 MobiDBLite consensus disorder prediction 525 555 - -
Pvu2g2873 631 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g2873 631 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 622 IPR044287 GO:0031047|GO:0051607
Pvu2g2873 631 MobiDBLite consensus disorder prediction 84 122 - -
Pvu2g2873 631 Pfam XS domain 300 414 IPR005380 GO:0031047
Pvu2g2873 631 CDD RRM_like_XS 303 414 IPR005380 GO:0031047
Pvu2g2873 631 MobiDBLite consensus disorder prediction 60 195 - -
Pvu2g2873 631 Coils Coil 466 509 - -
Pvu2g2873 631 Pfam XS zinc finger domain 229 267 IPR005381 GO:0031047
Pvu2g2873 631 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 15 622 - -
Pvu2g2873 631 MobiDBLite consensus disorder prediction 60 74 - -
Pvu2g2873 631 MobiDBLite consensus disorder prediction 150 168 - -
Pvu2g2873 631 Gene3D XS domain 295 473 IPR038588 -
Pvu2g2873 631 MobiDBLite consensus disorder prediction 169 187 - -
Pvu2g2873 631 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2873 Pvu-Chr2 44337834 44341715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2873 - - gmx:100807738 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2873 2 44337834 44341715 Pvu2g2873 2 44337834 44341715 ECH
Pvu2g2873 2 44337834 44341715 Pvu9g1648 9 23131828 23139557 PCT