Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1631 ATGGCTGAAGAAGCTTCAAAGACAACCACAACTCAAGAGGAAGTGGTGGTCGCTGACGTGGCGCCTCCCGAGCCATGGGACACCAGCGTTGTTGTTTCCGTTGAAGAAGAAGAAGAAGCAAAGGCATCATCTGAGAAGGAGAACATTCCAGAAACTGCGACGGAGGTTTCCAAAGATAACATTCCGGAATCAGGTTCTTTCAAGGAAGAGAGCACCATTGTCTCGGACCTACCAGAAACCGAGAAAAAGGCACTGCAAGAACTCAAACAGCTCATTCAGGAGGCACTGCATAAACACGAGTTTTCTGAGCCTCAGAATAACCACCCTCCCAAAGATGAAAAGCCCGAAGATGCCACCGACAACAAGGAAGAACAGAAGCCCGTGGAGGAAGAGAAAGAACATGCTGTTCATGCTGCTGCTGCTGCTGATGCTGCTGATGCTGCTGACGTAGCAGAAGCGACAGAAAAAGAAGCTGCGGAAGTGAAGGAAAGTGAAACTGAAACTAAGGTTGTTGAAGAGAAAGTGGCAGTTACCGATGCTGCTTGTGTTGAGGAGGATGGAGCGAAAACGGTGGAGGCTATCGAGGAGAGCGTTGTGGCTGTGTCTGTGTCTGAGGAGGAAGCGAAGGTGGAAGCTGATTCCGCTTCCCCCGAAGAGGTTTCGATTTGGGGAGTGCCGCTTCTTGCTGATGAAAGGAGCGATGTGATTCTGCTGAAGTTTCTGCGTGCGAGGGACTTCAAGGTGAAGGATGCGTTTGCGATGATAAAGGGGACGATTCGGTGGAGGAAGGAGTTCAAGATGGAGGAGTTGTTGGAGGAGGAGTTGGGGGATGATTTGGAGAAGGCGGTGTACATGCATGGGTTTGACAAGGAGGGTCACCCTGTGTGTTATAACATCTATGGGGAGTTTCAGAACAAGGAGTTGTACAAGAAGAGTTTCTCTGATGAGGAGAAGAGGCACAGGTTCCTCAGGTGGAGGATTCAGTTCCTGGAGAAGAGTATCAGGAAGCTTGATTTTGCCCCTGGTGGGATAAGCACCATTGTTCAAGTCAATGATCTCAAGAACTCTCCTGGACCTGCCAAGTGGGAGCTTAGACAGGCTACCAAACAGGCCCTGCAGTTGCTTCAGGATAACTATCCTGAGTTTGTAGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTATTTGGCAGTGAACAGGATGATAAGCCCTTTTCTTACTCAGAGAACCAAAAGCAAGTTTGTCTTTGCCGGCCCTTCCAAATCAGCCGAGACTCTTTTGAGATACATTGCTGCTGAGCAACTTCCGGTGAAGTATGGTGGACTAAGCAAAGATGGGGAGTTCGGAATTTCCGATGCTGTCACAGAAATTACAGTGAGGCCAGCAGCAAAACATACCGTGGAGTTTCCAGTTGCTGAGAACTCCCTACTGTCTTGGGAAATCAGAGTAATAGGGTGGGACGTAAGCTATGGTGCAGAGTTTGTGCCATGTTCAGAGGGAAGCTATACTGTGATCATCCAGAAGGCTATAAAGGTTGCTTCATCAGAAGAACCGGTGCTTTGCAACAATTATAAAATTGGTGAACCTGGGAAGGTGGTTCTCACCATTGACAACCAAAGCTCTAAGAAGAAGAAACTCTTGTACCGCTTGAAGGTGAAGCCCTCCTCTTCTGACTGA 1677 0.4854 MAEEASKTTTTQEEVVVADVAPPEPWDTSVVVSVEEEEEAKASSEKENIPETATEVSKDNIPESGSFKEESTIVSDLPETEKKALQELKQLIQEALHKHEFSEPQNNHPPKDEKPEDATDNKEEQKPVEEEKEHAVHAAAAADAADAADVAEATEKEAAEVKESETETKVVEEKVAVTDAACVEEDGAKTVEAIEESVVAVSVSEEEAKVEADSASPEEVSIWGVPLLADERSDVILLKFLRARDFKVKDAFAMIKGTIRWRKEFKMEELLEEELGDDLEKAVYMHGFDKEGHPVCYNIYGEFQNKELYKKSFSDEEKRHRFLRWRIQFLEKSIRKLDFAPGGISTIVQVNDLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKDGEFGISDAVTEITVRPAAKHTVEFPVAENSLLSWEIRVIGWDVSYGAEFVPCSEGSYTVIIQKAIKVASSEEPVLCNNYKIGEPGKVVLTIDNQSSKKKKLLYRLKVKPSSSD* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1631 558 ProSiteProfiles GOLD domain profile. 451 552 IPR009038 -
Pvu9g1631 558 PANTHER PATELLIN-3 PROTEIN 15 558 - -
Pvu9g1631 558 Pfam CRAL/TRIO, N-terminal domain 209 256 IPR011074 -
Pvu9g1631 558 PRINTS Cellular retinaldehyde-binding protein signature 236 258 - -
Pvu9g1631 558 PRINTS Cellular retinaldehyde-binding protein signature 399 418 - -
Pvu9g1631 558 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 272 447 IPR001251 -
Pvu9g1631 558 SMART sec14_4 277 444 IPR001251 -
Pvu9g1631 558 MobiDBLite consensus disorder prediction 1 15 - -
Pvu9g1631 558 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 452 554 IPR036598 -
Pvu9g1631 558 Gene3D GOLD domain 457 553 - -
Pvu9g1631 558 SUPERFAMILY CRAL/TRIO domain 282 444 IPR036865 -
Pvu9g1631 558 MobiDBLite consensus disorder prediction 149 169 - -
Pvu9g1631 558 Gene3D - 212 456 IPR036865 -
Pvu9g1631 558 MobiDBLite consensus disorder prediction 1 169 - -
Pvu9g1631 558 MobiDBLite consensus disorder prediction 74 139 - -
Pvu9g1631 558 SMART CRAL_TRIO_N_2 233 258 IPR011074 -
Pvu9g1631 558 CDD SEC14 283 442 IPR001251 -
Pvu9g1631 558 Pfam CRAL/TRIO domain 281 441 IPR001251 -
Pvu9g1631 558 PANTHER PATELLIN-1 15 558 IPR044834 GO:0008289
Pvu9g1631 558 MobiDBLite consensus disorder prediction 34 53 - -
Pvu9g1631 558 MobiDBLite consensus disorder prediction 54 73 - -
Pvu9g1631 558 SUPERFAMILY CRAL/TRIO N-terminal domain 73 274 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1631 Pvu-Chr9 22914729 22918105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1631 237 436 Acyl Lipid Metabolism Gene Families AT5G47730 27.778 3.28e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1631 - - gmx:100805585 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1631 9 22914729 22918105 Pvu9g1631 9 22914729 22918105 ECH
Pvu2g2861 2 44261232 44264439 Pvu9g1631 9 22914729 22918105 PCT