Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2861 ATGGCTGAGGAGGTTCCAAACCAAGCACCACCTTCTCAAGAGTCTGTGGTGCAAGTGGAGGAAGTCGTGGTAACTGATGTTCCTCAGCCTGCTGACAAAACACCGCCACCACCAGCCACAACCACCAGTGTTCCTGTTGAGAGAGATTCACCGCCGCAACCTGAGCCTGAGGCGCCGGAGAAGAAGCCTGTTGAGGAAACCGTCACTCTCGAGACTCACCTCTCCAAACCCAACAACGCTGATGATAGCAGCAATGATGAGAAAGTCTCTGAATTCAAGGAAGAAAGCACCAAACTTTCCGACCTATCGGAAAACCAAAACAAGGCACTCCAAGAACTCAAGAAGCTCGTTCAAGAAGCTCTCAAAAGTCACGAGTTTTCCTCCAATGATGAAAAGAAGACACCACCACCAACGGCTTTAACTGCTGAAAAGGAAGAACAAGAGCAGCCGCAGCAACAACAAGAAGTTGTGACTGAAGCTGAAGCTGATGCTGCCCCAGAAAAAACTGATGAAGAAGTTGAAACAAAGGAGGAGGAACAAGGAGAAAAAGAAGAAGGGAAGAAGGAGGAAGTGAGAGAAACGAAGGAAGATGCTACTGTGGATGACGATGGAGCAAAAACTGTGGAGGCCATTGAAGAGACTGTTGTTGCTGTCTCTTCTACTGTTCAGCCTCAAGCTGAAGAGAAAACGGAAGCCAAAGATGAAGCTTCACCGCCACTTCCACCTGAAGAAGTTTCCATTTGGGGAGTGCCGCTTCTTGCTGACGAGAGGAGCGATGTGATTCTTTTGAAGTTTCTGCGCGCGAGAGAGTTTAAAGTTAAGGAGGCGTTCACGATGCTGAAGAACACGATCCGGTGGAGGAAGGAGTTTGGGATGGAGGAGCTGATGGAGGAGAAGCTGGGGGATGAGTTGGAGAAGGTGGTGTTCATGCATGGCTTTGACAAGGAGGGCCACCCGGTGTGTTACAACATATACGGGGAGTTCCAGAACAAGGAGTTGTACAGGAAGACTTTTTCTGATGAGGAGAAGAGGGAGAAGTTCCTCAGATGGAGAATTCAGTTTCTGGAAAAGAGTATAAGGAAGTTGGATTTCAACCCTGGTGGCATTTGCACCATTGTTCAGGTCAATGATCTCAAGAACTCTCCTGGACCTGCCAAGTGGGAACTAAGACAAGCCACCAAAAATGCCCTACAATTGCTTCAAGACAATTATCCTGAATTTGTAGCCAAACAGGTGTTCATTAATGTACCATGGTGGTACCTGGCAGTGAATAGGATGATAAGCCCTTTTCTTACTCAGAGGAGTAAGAGTAAGTTTGTCTTTGCTGGACCTTCTAAATCAACGGAAACCCTTTTGAGATACATAGCTCCGGAGCAGCTTCCGGTGAAGTACGGTGGATTAAGCAAAGATGGGGAGTTCGGAAATACCGATGCTGTTACAGAAATCACAGTGAGGCCAGCAGCAAAGCATACTGTGGAATTTTCAGTTACAGAGAAGTGTTTACTCTCTTGGGAGCTGAGAGTAATAGGGTGGGAAGTAAGCTATGGTGCAGAATTTGTGCCAGATTCAGAAGGAAGCTATACAGTAATTGTCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAACCAGTGGTTTGCAACAGTTTTAAGGTTGGTGAACCTGGAAAAGTTGTTCTCACAATTGACAACACAAGCTCCAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACCAAGCCTTCCCCCTCAGATTAA 1752 0.4686 MAEEVPNQAPPSQESVVQVEEVVVTDVPQPADKTPPPPATTTSVPVERDSPPQPEPEAPEKKPVEETVTLETHLSKPNNADDSSNDEKVSEFKEESTKLSDLSENQNKALQELKKLVQEALKSHEFSSNDEKKTPPPTALTAEKEEQEQPQQQQEVVTEAEADAAPEKTDEEVETKEEEQGEKEEGKKEEVRETKEDATVDDDGAKTVEAIEETVVAVSSTVQPQAEEKTEAKDEASPPLPPEEVSIWGVPLLADERSDVILLKFLRAREFKVKEAFTMLKNTIRWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYGEFQNKELYRKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVQVNDLKNSPGPAKWELRQATKNALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRSKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLSKDGEFGNTDAVTEITVRPAAKHTVEFSVTEKCLLSWELRVIGWEVSYGAEFVPDSEGSYTVIVQKARKVASSEEPVVCNSFKVGEPGKVVLTIDNTSSKKKKLLYRLKTKPSPSD* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2861 583 SUPERFAMILY CRAL/TRIO domain 307 469 IPR036865 -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 165 179 - -
Pvu2g2861 583 PANTHER PATELLIN-3 PROTEIN 1 583 - -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 180 201 - -
Pvu2g2861 583 Pfam CRAL/TRIO, N-terminal domain 243 282 IPR011074 -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 1 106 - -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 144 158 - -
Pvu2g2861 583 PRINTS Cellular retinaldehyde-binding protein signature 261 283 - -
Pvu2g2861 583 PRINTS Cellular retinaldehyde-binding protein signature 424 443 - -
Pvu2g2861 583 Gene3D GOLD domain 480 577 - -
Pvu2g2861 583 Pfam CRAL/TRIO domain 306 466 IPR001251 -
Pvu2g2861 583 CDD SEC14 303 467 IPR001251 -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 218 243 - -
Pvu2g2861 583 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 297 472 IPR001251 -
Pvu2g2861 583 SMART sec14_4 302 469 IPR001251 -
Pvu2g2861 583 PANTHER PATELLIN-1 1 583 IPR044834 GO:0008289
Pvu2g2861 583 MobiDBLite consensus disorder prediction 121 201 - -
Pvu2g2861 583 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 478 576 IPR036598 -
Pvu2g2861 583 SUPERFAMILY CRAL/TRIO N-terminal domain 99 298 IPR036273 -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 80 101 - -
Pvu2g2861 583 Gene3D - 222 289 - -
Pvu2g2861 583 Gene3D - 291 479 IPR036865 -
Pvu2g2861 583 SMART CRAL_TRIO_N_2 258 283 IPR011074 -
Pvu2g2861 583 ProSiteProfiles GOLD domain profile. 476 577 IPR009038 -
Pvu2g2861 583 MobiDBLite consensus disorder prediction 53 69 - -
Pvu2g2861 583 Coils Coil 99 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2861 Pvu-Chr2 44261232 44264439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2861 262 461 Acyl Lipid Metabolism Gene Families AT1G55840 27.014 7.38e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2861 - - gmx:100788197 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2861 2 44261232 44264439 Pvu2g2861 2 44261232 44264439 ECH
Pvu2g2861 2 44261232 44264439 Pvu9g1631 9 22914729 22918105 PCT