Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1627 ATGGCAGCTGAGCTAGTCAATGGTGCAACAAGCGAGAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATCTGCGAGCTAGTTGCTCATGATAGAAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACCCTGATACTCAACTTTATGCTGTCCTGCTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCTGGTGATTGATACTGGGATTATTCCTATTCTAGTAAAAATTGTGAAGAAAAAATCTGATTTGGCTGTGAGGGAGAGGATCTTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCATCTGGAAAGTTTCCACAGTATTATAATGCATATTATGAGTTGGTGAGTGCCGGAGTGCAGTTTTCTCAAAGGGATCAAGTGGTCCAATCAGACCATCCCAGTTCACAACCTAATAGGACTAGTAATGTACCAAACAGGGAGCAGGCCGCACCTAGACATGAAGCGGTTTCTCAGCAAGCTGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTGGATGCTGTTGATGCTCAAAATCCTCAGGGAGCAAGGGATGAATTCACCCTAGATCTTGTAGAACAATGTTCTTTTCAAAAGCAAAGGGTTATGCATCTTGTGATGGCTTCTCGAGATGAAAGGATAGTTTCTCGGGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGTTACAACAACTGCAACTCGGTTTGACCATGAGGAAGGGGAGGAAGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGTAAGGGAAAGGCTTGTGCAAGACCTGAAGATGAGGAGACAGAAACCGACATCCCTCCCTTGGGTTTACTTGGTGAGAGACTCAATCGTCCACTAATACGACCACTCACAATAGAACCGCAATCTCGAGATGCTGGAACTCGATCTCCACCTGTTGTGATCCTGCCATCTCGTGAAGCCGACACTCACACTCGATCTCCACCTGTTGTGATTCCACCGCCACGGCCAAAACAGAACGGCGATGTTCCGCATCATGTGGCAATTCCACCACCACCTGCAAAGCATGTTGAGAGGGAGAAGTTTTTTCAGGAAAACAAGGATGGGTCTAATTTGTCTGGCCACATTAGAGGCCTCTCCTTGCATAGTCGTAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGAATGA 1296 0.4483 MAAELVNGATSEKLAETDWTKNIEICELVAHDRRQARDVVKAIKKRLGSKHPDTQLYAVLLLEMLMNNIGEHIHELVIDTGIIPILVKIVKKKSDLAVRERIFLLLDATQTSLGGASGKFPQYYNAYYELVSAGVQFSQRDQVVQSDHPSSQPNRTSNVPNREQAAPRHEAVSQQAESQTVPESSIIQKASNALEVLKEVLDAVDAQNPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLLAGRVTTTATRFDHEEGEEEEEPEQLVRRLRKGKACARPEDEETETDIPPLGLLGERLNRPLIRPLTIEPQSRDAGTRSPPVVILPSREADTHTRSPPVVIPPPRPKQNGDVPHHVAIPPPPAKHVEREKFFQENKDGSNLSGHIRGLSLHSRNGSSSHSGSFDFSE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1627 431 MobiDBLite consensus disorder prediction 298 317 - -
Pvu9g1627 431 Gene3D - 2 136 IPR008942 -
Pvu9g1627 431 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Pvu9g1627 431 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 430 - -
Pvu9g1627 431 MobiDBLite consensus disorder prediction 141 163 - -
Pvu9g1627 431 Coils Coil 187 207 - -
Pvu9g1627 431 Gene3D - 175 274 IPR038425 -
Pvu9g1627 431 MobiDBLite consensus disorder prediction 361 384 - -
Pvu9g1627 431 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Pvu9g1627 431 MobiDBLite consensus disorder prediction 400 431 - -
Pvu9g1627 431 CDD VHS 2 130 - -
Pvu9g1627 431 SUPERFAMILY ENTH/VHS domain 4 137 IPR008942 -
Pvu9g1627 431 MobiDBLite consensus disorder prediction 354 431 - -
Pvu9g1627 431 MobiDBLite consensus disorder prediction 385 399 - -
Pvu9g1627 431 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Pvu9g1627 431 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Pvu9g1627 431 PANTHER TOM1-LIKE PROTEIN 1 430 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pvu9g1627 431 SUPERFAMILY GAT-like domain 144 268 - -
Pvu9g1627 431 MobiDBLite consensus disorder prediction 141 184 - -
Pvu9g1627 431 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Pvu9g1627 431 CDD GAT_GGA_like_plant 186 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1627 Pvu-Chr9 22880190 22886852 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1627 - - pvu:PHAVU_009G157500g 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1627 9 22880190 22886852 Pvu9g1627 9 22880190 22886852 ECH
Pvu2g2858 2 44196549 44201865 Pvu9g1627 9 22880190 22886852 PCT