Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1599 ATGGAACCCGACCATTCTGATTCGAACTTGCTGTTGTTTCTGCCGGACGATGTTTTCGCCGTCGTTTCTCGGTTCCTGTCGCCGAGAGACGTGTGCAATCTGTGTCTGTGCTGCAAGAGTTTGAACGCTCTCGTGGCCTCTGAGAAACTCTGGCTCACGCAATGTGACGATTTGGGCATAGTGCCCCACAAGGACCTTGTGGAATGGAGAAAGGGTGTGGCTTCTTACAAGGCGCTTTGTCGTTTTCTGGTGGGTGTGAAACCATTGATGGGAATATGGGTTCACCAGAATCCTGAGCTTGGGAACGTGGTTTATGTGATGCCTGGTTTTGTCTCTGTTGTTGGGTGCAGGATAATTCCCCAGGAGCTTGGCCCTTTGGGGATTGAAGAGGGTCCCATACTGTGGGCTTCTGTGTTTGAGGTTGTTAGTGATTTTGATGGTTCCATGATGTTTTTTCTTCATGGGAGGGAGAAGGGGGTGAATTATGTTTATCCAGGTTCGGTCAAGCTTAACAACAAGTCATGTAATGTACTGTTGCTAGAGGTTGAACCTGGGGGGTGTAGCAGTGTCAGTGCTTTGTTGCAGAGTAAGAGCTTTGTGCATCACTCGGGCATGGAGTCTTCATCGTCGAGGAAGGTTTGTAGGTCGATTAGCGATGTCTCTAGTTCTCAAAGGGTGGTTGGAAATGGTGAAGGGATGGTTGGTTTTGGGAAGTTAGCTTTTAGTGATAGGAGAAAGTTGCTTGAGGTTACTGCTAGTCATGTTCGACAAAAGGTTCCGGATAATATGATTGGGCCGTTGTTTCCTAGGTTGAGGGATGATGAGGAGAATTTTCAGAAGGATTTGGTGCTTTTGTGGGAAAGAAGATCACTTCTTAGTCAAATGTATAAGGTTGGTAGTGGTGAGGTTGATGAGTATAAGTTGAGTTCTCAAGAGGCAGTTGATCCAACCCAGTTGGAATTGGGTGATGTTAGGGCGAGATTTGACCGTTCAAGGTCTATCTCTAATCCTCTGCCCGAGGAGGATGCTAACACTCAATGCATCAAGAGGAAAAGCCTTCGGGGATATTTCTGGAATGGCATTAAACAAATGCTTGGAAGATCAAATTCAATAAATGGCAGTCATTCAGTTTCCAAGAAGCTTATGTCAAGCGGTGAGATTAGGCATGCACGGCTTCAAGAATTCCTTAGATCGAGTGACACAGTAAGACTAACCTTAAAAGCATCAACTATGAAGCTATCTTCTTACCGAGCATGGCCGAATATGCACGACAGTAGGTTTGCGCTTTACAAGTTGCCATTGCGAGTTCCTAGAGATGACCAAGAATATGCTGGTTTATGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAGCCTTCTGAAGACAAGCCTGGAAAGGCTTTGTTCTTTCTTCTGCTCTCTTACGAGGAGTTCCAGGGACAACAGCTTCTCATTGCAACCAAAATTTTGGAAGGCACCCACTATGTTTTGCATCCAAATGGTTCAGCAATGTTTACAGCAAATATCAATGAACCTTCGTCCGAACCCTTTCCCAGGGACACTGATGCAGACTTGTTTCCTGTGACTATCAACCATGCTTTTGTGGGAGAGGGTATTGCAAGTGGTTATGGGTTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGTTTTTCAAAATGGCATCCTTGCTTTCATGTGGAAGGAGTCAAAACTTGTTTTAACCTTGCAAAGACTTAACTTGCAAGAACTTTTGAAGAAGGGTGAAAGGGTATATTCTCTGCCTCCGGTTACCAATTTTTCATATCTGACAAAGTCCTACTCGAATGTGTTTGCTGGCCTCCCCAGCTCTTCCAATTTTTTGTCTTCACCAAGGAATGGACAATAG 1884 0.4533 MEPDHSDSNLLLFLPDDVFAVVSRFLSPRDVCNLCLCCKSLNALVASEKLWLTQCDDLGIVPHKDLVEWRKGVASYKALCRFLVGVKPLMGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQELGPLGIEEGPILWASVFEVVSDFDGSMMFFLHGREKGVNYVYPGSVKLNNKSCNVLLLEVEPGGCSSVSALLQSKSFVHHSGMESSSSRKVCRSISDVSSSQRVVGNGEGMVGFGKLAFSDRRKLLEVTASHVRQKVPDNMIGPLFPRLRDDEENFQKDLVLLWERRSLLSQMYKVGSGEVDEYKLSSQEAVDPTQLELGDVRARFDRSRSISNPLPEEDANTQCIKRKSLRGYFWNGIKQMLGRSNSINGSHSVSKKLMSSGEIRHARLQEFLRSSDTVRLTLKASTMKLSSYRAWPNMHDSRFALYKLPLRVPRDDQEYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIATKILEGTHYVLHPNGSAMFTANINEPSSEPFPRDTDADLFPVTINHAFVGEGIASGYGFRYPGSKPGSLFVFQNGILAFMWKESKLVLTLQRLNLQELLKKGERVYSLPPVTNFSYLTKSYSNVFAGLPSSSNFLSSPRNGQ* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1599 627 Pfam F-box domain 14 52 IPR001810 GO:0005515
Pvu9g1599 627 Gene3D - 2 81 - -
Pvu9g1599 627 ProSiteProfiles F-box domain profile. 8 54 IPR001810 GO:0005515
Pvu9g1599 627 PANTHER F-BOX PROTEIN FAMILY-LIKE 3 625 - -
Pvu9g1599 627 PANTHER F-BOX PROTEIN FAMILY-LIKE 3 625 IPR040275 -
Pvu9g1599 627 SUPERFAMILY F-box domain 4 65 IPR036047 GO:0005515
Pvu9g1599 627 Pfam Cyclin D1 binding domain 525 581 - -
Pvu9g1599 627 SMART fbox_2 14 54 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1599 Pvu-Chr9 22457160 22460825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1599 - - gmx:100814383 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2822 2 43879204 43881132 Pvu9g1599 9 22457160 22460825 PCT