Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2822 ATGTCTTCTGATCCAAGCTTGCTCCTGTGCCTACCCGATGATTTGTTTGCCATGGTGTTGCGGTTCCTCTTGCCCAGAGACGTCTGCAATCTCAGTCTCTGCTGCAAGAGTCTCCATGCCTGTGCATCTTCAGAAAAAGTGTGGCTCACTCAGTGTGACATGGTGGGGGTGGTGCCCCACGGGGACCTTGTTGAGTGGAGGGAGGGTGTGTCGTCTTACAAGGCTCTTTGTCGTTTCCTTTTGAGGGTTAAACCGTTGCTTGGAATATGGGTTCATCAGAACCCTGAGCTTGGCAACCTTGTCTATGTCATGCCTGGTTTTGTTTCGGTTGTCGGGTGCCGGATAATTCCTCAGGAGCTTGGTCATTTGGGGATTCAAGATGGTCCTATCCAATGGTCATCTGTGTTTGAAGTTATTGGTGATTTTGATGGTTCAACTACCTTTTTTCTCCATGGAAGGGAAGAGGAGACAGACTATGTTCATCCTGGTTCGGTCAAGTATATAGATAAGTCCTGCAATGTGCTGTTGCTTGAGATTGAAGGTAGGGTACAAGATTATGGTAGTAGTAGCAGTAGCAGTAGCAGCAGCAGTACTACTGCTTTGTTGCATGATTCGGGTGCGATGATATCAGGGAGGGTTTGTAGGTCAAACAGTGAGATCTCCAGGTTGCAAAGAGAGGGTGGAAATGCTGAGGCAATAGTTCCTTTCAACAAGTTGGCTTTTAGTGATAGAAAAAGGTTGCTTGAGGTCACCATCGGCCTAGTTCGACAAGAGGTTCCTGGTATGGACGATGGACCATTGTTTCCTGCGATGAGAGATGACTGTGACAACTTTCACAAAAATTTGGTGCTTTTGAAGGAAAGAAGAGCAATCCTTTGTGAAATGTGCAGCCTTGTTAGTAGCCGAATTGACAATGAGGAAAGTTCTAAAGGGGCAGACGGTCCATTGCAATCAGAGCAGGATGACATAAGAAAGAGTTGTAACTGGTCCAAGGATTTCTCTAATCTGTTGAACAAGGAGAAAGGTCACATACAATGCACCAAGAAGAAAAGTCTTGGTGGATATTTCTGGGGTGGCTTTAAACAGATCCTTAGAAAATCAAGTTCAGTTAATGAAAGTCATGCGATTTTGGAGAAGTTTACTTCAAGACGTGAGACAAAGCATGCGCGGCTTGAAGATTTTCTTAGATCAAGTGATACAATAGGGCTAACATTAAAGGCATCAACTGTAAAATTATCTACTTACCGTGCATGGCCAAACATGCCTGATAATTGGTTTGCACTTTTCAAGATGCCCTTACAAGTTCCCTCAGCGGACCAAATTTATGCGGGTTTGTGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAACCTTCTCAAGACAAGCCGGGAAAGGCTCTATTCTTTCTTCTGCTCTCTTATGAAGAGTCCCAAGAACAAAAGCTTCTTATTGCAACAAAAATATTGGAAGGAGAGGGTATTTCAAATGGTTATGGATTCAGATACCCTGGATCAAAGCCCGGTTCCCTCTTTATATTTGAAAATGGTGTCCTTGCCTTTGTTTGGAAGGACACTATGTCTGTCTTGACTTTGCAGAGACTCCACCTGCAAGAACTTTTGAAGAAAGGAGAGAGAGTACCCTCTCTGCCTCCCATTAACAATTTTTCTTATTTGACAAAGTCGTACTCAAACGTGTTTACAGGCTTTCCTAGTGCTTCCACTTCCTCACCTTCACCAAGCTAG 1740 0.4437 MSSDPSLLLCLPDDLFAMVLRFLLPRDVCNLSLCCKSLHACASSEKVWLTQCDMVGVVPHGDLVEWREGVSSYKALCRFLLRVKPLLGIWVHQNPELGNLVYVMPGFVSVVGCRIIPQELGHLGIQDGPIQWSSVFEVIGDFDGSTTFFLHGREEETDYVHPGSVKYIDKSCNVLLLEIEGRVQDYGSSSSSSSSSSTTALLHDSGAMISGRVCRSNSEISRLQREGGNAEAIVPFNKLAFSDRKRLLEVTIGLVRQEVPGMDDGPLFPAMRDDCDNFHKNLVLLKERRAILCEMCSLVSSRIDNEESSKGADGPLQSEQDDIRKSCNWSKDFSNLLNKEKGHIQCTKKKSLGGYFWGGFKQILRKSSSVNESHAILEKFTSRRETKHARLEDFLRSSDTIGLTLKASTVKLSTYRAWPNMPDNWFALFKMPLQVPSADQIYAGLWGGTFGWPPGKPSQDKPGKALFFLLLSYEESQEQKLLIATKILEGEGISNGYGFRYPGSKPGSLFIFENGVLAFVWKDTMSVLTLQRLHLQELLKKGERVPSLPPINNFSYLTKSYSNVFTGFPSASTSSPSPS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2822 579 Pfam F-box domain 8 49 IPR001810 GO:0005515
Pvu2g2822 579 SMART fbox_2 11 51 IPR001810 GO:0005515
Pvu2g2822 579 SUPERFAMILY F-box domain 3 59 IPR036047 GO:0005515
Pvu2g2822 579 Gene3D - 2 85 - -
Pvu2g2822 579 ProSiteProfiles F-box domain profile. 5 51 IPR001810 GO:0005515
Pvu2g2822 579 PANTHER F-BOX PROTEIN FAMILY-LIKE 490 578 IPR040275 -
Pvu2g2822 579 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 490 IPR040275 -
Pvu2g2822 579 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 490 - -
Pvu2g2822 579 PANTHER F-BOX PROTEIN FAMILY-LIKE 490 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2822 Pvu-Chr2 43879204 43881132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2822 - - gmx:100781734 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2822 2 43879204 43881132 Pvu2g2822 2 43879204 43881132 ECH
Pvu2g2822 2 43879204 43881132 Pvu9g1599 9 22457160 22460825 PCT